Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC132863.2-201ENSMUST00000226643 799 ntBASIC9.42□□□□□ -0.9
Sdc1P18828 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Sdc1P18828 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.42□□□□□ -0.9
Sdc1P18828 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Sdc1P18828 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.42□□□□□ -0.9
Sdc1P18828 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.42□□□□□ -0.9
Sdc1P18828 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Sdc1P18828 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Sdc1P18828 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Sdc1P18828 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
Sdc1P18828 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC9.41□□□□□ -0.9
Sdc1P18828 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Sdc1P18828 Gm13612-201ENSMUST00000119276 390 ntBASIC9.41□□□□□ -0.9
Sdc1P18828 Gm13342-201ENSMUST00000121055 207 ntBASIC9.41□□□□□ -0.9
Sdc1P18828 Gm15321-201ENSMUST00000121290 288 ntBASIC9.41□□□□□ -0.9
Sdc1P18828 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 Gm2495-201ENSMUST00000191160 466 ntBASIC9.41□□□□□ -0.9
Sdc1P18828 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.41□□□□□ -0.9
Sdc1P18828 Gm42937-201ENSMUST00000197360 752 ntBASIC9.41□□□□□ -0.9
Sdc1P18828 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.41□□□□□ -0.9
Sdc1P18828 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.41□□□□□ -0.9
Sdc1P18828 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.41□□□□□ -0.9
Sdc1P18828 Gm7446-201ENSMUST00000221035 1240 ntBASIC9.41□□□□□ -0.9
Sdc1P18828 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.41□□□□□ -0.9
Sdc1P18828 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC9.41□□□□□ -0.9
Sdc1P18828 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Sdc1P18828 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sdc1P18828 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC9.4□□□□□ -0.9
Sdc1P18828 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Sdc1P18828 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Sdc1P18828 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.4□□□□□ -0.9
Sdc1P18828 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Sdc1P18828 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Sdc1P18828 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Sdc1P18828 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.4□□□□□ -0.9
Sdc1P18828 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC9.4□□□□□ -0.9
Sdc1P18828 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC9.4□□□□□ -0.9
Sdc1P18828 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sdc1P18828 Gm27989-201ENSMUST00000184721 107 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms