Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC13.41□□□□□ -0.26
Col1a1P11087 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC13.41□□□□□ -0.26
Col1a1P11087 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col1a1P11087 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.41□□□□□ -0.26
Col1a1P11087 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC13.41□□□□□ -0.26
Col1a1P11087 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col1a1P11087 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Col1a1P11087 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.41□□□□□ -0.26
Col1a1P11087 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Gm15617-201ENSMUST00000118973 771 ntBASIC13.41□□□□□ -0.26
Col1a1P11087 Gm12461-201ENSMUST00000120231 1239 ntBASIC13.41□□□□□ -0.26
Col1a1P11087 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.41□□□□□ -0.26
Col1a1P11087 Gm13827-201ENSMUST00000148801 372 ntBASIC13.41□□□□□ -0.26
Col1a1P11087 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC13.41□□□□□ -0.26
Col1a1P11087 Gm4930-201ENSMUST00000219926 1087 ntBASIC13.41□□□□□ -0.26
Col1a1P11087 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Col1a1P11087 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.41□□□□□ -0.26
Col1a1P11087 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Col1a1P11087 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col1a1P11087 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.41□□□□□ -0.26
Col1a1P11087 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col1a1P11087 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col1a1P11087 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Col1a1P11087 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col1a1P11087 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.4□□□□□ -0.26
Col1a1P11087 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col1a1P11087 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.4□□□□□ -0.26
Col1a1P11087 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Gm23595-201ENSMUST00000104306 130 ntBASIC13.4□□□□□ -0.26
Col1a1P11087 Gm14113-201ENSMUST00000121399 976 ntBASIC13.4□□□□□ -0.26
Col1a1P11087 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC13.4□□□□□ -0.26
Col1a1P11087 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC13.4□□□□□ -0.26
Col1a1P11087 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC13.4□□□□□ -0.26
Col1a1P11087 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Col1a1P11087 Gm45527-201ENSMUST00000211052 774 ntBASIC13.4□□□□□ -0.26
Col1a1P11087 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC13.4□□□□□ -0.26
Col1a1P11087 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC13.4□□□□□ -0.26
Col1a1P11087 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC13.4□□□□□ -0.26
Col1a1P11087 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.4□□□□□ -0.26
Col1a1P11087 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Col1a1P11087 n-R5s71-201ENSMUST00000093668 119 ntBASIC13.4□□□□□ -0.26
Col1a1P11087 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col1a1P11087 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col1a1P11087 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col1a1P11087 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col1a1P11087 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col1a1P11087 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Gm42970-201ENSMUST00000196407 1352 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.39□□□□□ -0.27
Col1a1P11087 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.39□□□□□ -0.27
Col1a1P11087 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.39□□□□□ -0.27
Col1a1P11087 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col1a1P11087 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC13.39□□□□□ -0.27
Col1a1P11087 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col1a1P11087 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms