Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.32□□□□□ -0.76
P06344 Mir8093-201ENSMUST00000185043 137 ntBASIC10.32□□□□□ -0.76
P06344 Gm5982-201ENSMUST00000196234 512 ntBASIC10.32□□□□□ -0.76
P06344 Gm44506-201ENSMUST00000206278 965 ntBASIC10.32□□□□□ -0.76
P06344 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Gm9132-201ENSMUST00000210182 832 ntBASIC10.32□□□□□ -0.76
P06344 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.32□□□□□ -0.76
P06344 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.32□□□□□ -0.76
P06344 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.32□□□□□ -0.76
P06344 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.32□□□□□ -0.76
P06344 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
P06344 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
P06344 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
P06344 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
P06344 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.32□□□□□ -0.76
P06344 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P06344 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.31□□□□□ -0.76
P06344 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
P06344 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.31□□□□□ -0.76
P06344 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.31□□□□□ -0.76
P06344 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.31□□□□□ -0.76
P06344 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
P06344 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.31□□□□□ -0.76
P06344 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
P06344 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.31□□□□□ -0.76
P06344 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
P06344 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
P06344 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.31□□□□□ -0.76
P06344 Gm11700-201ENSMUST00000119409 403 ntBASIC10.31□□□□□ -0.76
P06344 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Gm8459-201ENSMUST00000162504 760 ntBASIC10.31□□□□□ -0.76
P06344 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Gm17391-201ENSMUST00000171036 126 ntBASIC10.31□□□□□ -0.76
P06344 Gm19459-201ENSMUST00000176240 835 ntBASIC10.31□□□□□ -0.76
P06344 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.31□□□□□ -0.76
P06344 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
P06344 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.31□□□□□ -0.76
P06344 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.31□□□□□ -0.76
P06344 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.31□□□□□ -0.76
P06344 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Gm10179-201ENSMUST00000086233 688 ntBASIC10.31□□□□□ -0.76
P06344 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
P06344 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
P06344 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.31□□□□□ -0.76
P06344 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
P06344 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.31□□□□□ -0.76
P06344 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.31□□□□□ -0.76
P06344 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.31□□□□□ -0.76
P06344 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
P06344 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P06344 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
P06344 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P06344 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.3□□□□□ -0.76
P06344 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P06344 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P06344 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P06344 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
P06344 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
P06344 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P06344 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P06344 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms