Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
P04213 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
P04213 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
P04213 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Gm12579-201ENSMUST00000118040 783 ntBASIC11.05□□□□□ -0.64
P04213 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.05□□□□□ -0.64
P04213 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
P04213 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.05□□□□□ -0.64
P04213 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.05□□□□□ -0.64
P04213 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.05□□□□□ -0.64
P04213 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.05□□□□□ -0.64
P04213 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
P04213 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.05□□□□□ -0.64
P04213 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.05□□□□□ -0.64
P04213 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
P04213 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.05□□□□□ -0.64
P04213 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
P04213 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P04213 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P04213 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P04213 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P04213 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.04□□□□□ -0.64
P04213 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P04213 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.04□□□□□ -0.64
P04213 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
P04213 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.04□□□□□ -0.64
P04213 Gm14724-201ENSMUST00000118400 537 ntBASIC11.04□□□□□ -0.64
P04213 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.04□□□□□ -0.64
P04213 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
P04213 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Gm18734-201ENSMUST00000172937 808 ntBASIC11.04□□□□□ -0.64
P04213 Gm8815-201ENSMUST00000173809 620 ntBASIC11.04□□□□□ -0.64
P04213 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.04□□□□□ -0.64
P04213 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.04□□□□□ -0.64
P04213 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.04□□□□□ -0.64
P04213 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
P04213 Gm4978-201ENSMUST00000071565 801 ntBASIC11.04□□□□□ -0.64
P04213 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.04□□□□□ -0.64
P04213 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
P04213 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
P04213 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
P04213 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
P04213 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.03□□□□□ -0.64
P04213 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
P04213 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P04213 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
P04213 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms