Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 Gm23200-201ENSMUST00000104379 132 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 Gm11511-201ENSMUST00000118146 540 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 Gm4909-201ENSMUST00000118749 794 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 Gm5419-201ENSMUST00000119301 527 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.1□□□□□ -0.63
Hcn1O88704 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hcn1O88704 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.1□□□□□ -0.63
Hcn1O88704 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 Gm19208-201ENSMUST00000213861 912 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.1□□□□□ -0.63
Hcn1O88704 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hcn1O88704 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hcn1O88704 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.09□□□□□ -0.63
Hcn1O88704 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.09□□□□□ -0.63
Hcn1O88704 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.09□□□□□ -0.63
Hcn1O88704 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.09□□□□□ -0.63
Hcn1O88704 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.09□□□□□ -0.63
Hcn1O88704 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hcn1O88704 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.09□□□□□ -0.63
Hcn1O88704 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Hcn1O88704 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Hcn1O88704 Gm17040-202ENSMUST00000170597 889 ntBASIC11.09□□□□□ -0.63
Hcn1O88704 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.09□□□□□ -0.63
Hcn1O88704 Mir7070-201ENSMUST00000183657 86 ntBASIC11.09□□□□□ -0.63
Hcn1O88704 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.09□□□□□ -0.63
Hcn1O88704 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Gm18038-201ENSMUST00000197900 485 ntBASIC11.09□□□□□ -0.63
Hcn1O88704 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.09□□□□□ -0.63
Hcn1O88704 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Hcn1O88704 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.09□□□□□ -0.63
Hcn1O88704 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.09□□□□□ -0.63
Hcn1O88704 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.09□□□□□ -0.63
Hcn1O88704 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Hcn1O88704 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.09□□□□□ -0.63
Hcn1O88704 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.09□□□□□ -0.63
Hcn1O88704 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Hcn1O88704 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Hcn1O88704 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Hcn1O88704 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Hcn1O88704 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms