Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Tspan6O70401 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tspan6O70401 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tspan6O70401 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tspan6O70401 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tspan6O70401 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tspan6O70401 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.31□□□□□ -0.6
Tspan6O70401 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.31□□□□□ -0.6
Tspan6O70401 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tspan6O70401 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tspan6O70401 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tspan6O70401 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.3□□□□□ -0.6
Tspan6O70401 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.3□□□□□ -0.6
Tspan6O70401 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.3□□□□□ -0.6
Tspan6O70401 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.3□□□□□ -0.6
Tspan6O70401 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.3□□□□□ -0.6
Tspan6O70401 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Tspan6O70401 Gm14219-201ENSMUST00000120414 288 ntBASIC11.3□□□□□ -0.6
Tspan6O70401 Gm15329-201ENSMUST00000121408 155 ntBASIC11.3□□□□□ -0.6
Tspan6O70401 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.3□□□□□ -0.6
Tspan6O70401 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.3□□□□□ -0.6
Tspan6O70401 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.3□□□□□ -0.6
Tspan6O70401 Mir6407-201ENSMUST00000184510 101 ntBASIC11.3□□□□□ -0.6
Tspan6O70401 Gm29410-201ENSMUST00000188383 694 ntBASIC11.3□□□□□ -0.6
Tspan6O70401 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.3□□□□□ -0.6
Tspan6O70401 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Tspan6O70401 Gm9139-201ENSMUST00000218817 700 ntBASIC11.3□□□□□ -0.6
Tspan6O70401 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.3□□□□□ -0.6
Tspan6O70401 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Tspan6O70401 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.3□□□□□ -0.6
Tspan6O70401 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Tspan6O70401 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.3□□□□□ -0.6
Tspan6O70401 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Tspan6O70401 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tspan6O70401 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.3□□□□□ -0.6
Tspan6O70401 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tspan6O70401 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tspan6O70401 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Tspan6O70401 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Tspan6O70401 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.29□□□□□ -0.6
Tspan6O70401 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tspan6O70401 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tspan6O70401 Gm13422-201ENSMUST00000118834 504 ntBASIC11.29□□□□□ -0.6
Tspan6O70401 Gm10169-201ENSMUST00000121822 348 ntBASIC11.29□□□□□ -0.6
Tspan6O70401 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.29□□□□□ -0.6
Tspan6O70401 Gm6407-201ENSMUST00000176468 549 ntBASIC11.29□□□□□ -0.6
Tspan6O70401 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.29□□□□□ -0.6
Tspan6O70401 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.29□□□□□ -0.6
Tspan6O70401 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Gm42816-201ENSMUST00000198433 325 ntBASIC11.29□□□□□ -0.6
Tspan6O70401 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.29□□□□□ -0.6
Tspan6O70401 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Tspan6O70401 Gm3619-201ENSMUST00000219947 775 ntBASIC11.29□□□□□ -0.6
Tspan6O70401 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.29□□□□□ -0.6
Tspan6O70401 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.29□□□□□ -0.6
Tspan6O70401 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tspan6O70401 Gm10263-201ENSMUST00000085163 300 ntBASIC11.29□□□□□ -0.6
Tspan6O70401 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tspan6O70401 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tspan6O70401 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tspan6O70401 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms