Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarce1O54941 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.71□□□□□ -0.21
Smarce1O54941 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smarce1O54941 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Gm12463-201ENSMUST00000118271 849 ntBASIC13.71□□□□□ -0.21
Smarce1O54941 Gm13665-201ENSMUST00000120830 528 ntBASIC13.71□□□□□ -0.21
Smarce1O54941 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smarce1O54941 Gm27627-201ENSMUST00000183644 150 ntBASIC13.71□□□□□ -0.21
Smarce1O54941 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.71□□□□□ -0.21
Smarce1O54941 Mir7085-201ENSMUST00000184353 66 ntBASIC13.71□□□□□ -0.21
Smarce1O54941 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.71□□□□□ -0.21
Smarce1O54941 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Gm9797-202ENSMUST00000218003 294 ntBASIC13.71□□□□□ -0.21
Smarce1O54941 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarce1O54941 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.71□□□□□ -0.22
Smarce1O54941 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.71□□□□□ -0.22
Smarce1O54941 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarce1O54941 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarce1O54941 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarce1O54941 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Smarce1O54941 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smarce1O54941 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.71□□□□□ -0.22
Smarce1O54941 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Smarce1O54941 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarce1O54941 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarce1O54941 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarce1O54941 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarce1O54941 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.7□□□□□ -0.22
Smarce1O54941 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.7□□□□□ -0.22
Smarce1O54941 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarce1O54941 Gm14071-201ENSMUST00000117817 509 ntBASIC13.7□□□□□ -0.22
Smarce1O54941 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.7□□□□□ -0.22
Smarce1O54941 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Gm5616-201ENSMUST00000165252 384 ntBASIC13.7□□□□□ -0.22
Smarce1O54941 Gm8741-201ENSMUST00000174736 384 ntBASIC13.7□□□□□ -0.22
Smarce1O54941 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 AA914427-201ENSMUST00000193194 1166 ntBASIC13.7□□□□□ -0.22
Smarce1O54941 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarce1O54941 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarce1O54941 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarce1O54941 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Smarce1O54941 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC13.7□□□□□ -0.22
Smarce1O54941 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.7□□□□□ -0.22
Smarce1O54941 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smarce1O54941 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarce1O54941 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smarce1O54941 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Smarce1O54941 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms