Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Gm20493-201ENSMUST00000173706 213 ntBASIC17.5■□□□□ 0.39
Polr1aO35134 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Gm33080-201ENSMUST00000205429 172 ntBASIC17.5■□□□□ 0.39
Polr1aO35134 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC17.5■□□□□ 0.39
Polr1aO35134 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Polr1aO35134 AC155245.1-201ENSMUST00000222266 1804 ntBASIC17.49■□□□□ 0.39
Polr1aO35134 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Polr1aO35134 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Gm42913-201ENSMUST00000197936 1853 ntBASIC17.49■□□□□ 0.39
Polr1aO35134 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Gm8019-201ENSMUST00000119317 587 ntBASIC17.49■□□□□ 0.39
Polr1aO35134 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC17.49■□□□□ 0.39
Polr1aO35134 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC17.49■□□□□ 0.39
Polr1aO35134 Nsmce2-203ENSMUST00000227173 1122 ntBASIC17.49■□□□□ 0.39
Polr1aO35134 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Polr1aO35134 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC17.49■□□□□ 0.39
Polr1aO35134 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Polr1aO35134 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Gm42829-201ENSMUST00000198417 2585 ntBASIC17.48■□□□□ 0.39
Polr1aO35134 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Polr1aO35134 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC17.48■□□□□ 0.39
Polr1aO35134 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Polr1aO35134 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC17.48■□□□□ 0.39
Polr1aO35134 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Polr1aO35134 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC17.48■□□□□ 0.39
Polr1aO35134 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Polr1aO35134 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Polr1aO35134 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Polr1aO35134 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC17.47■□□□□ 0.39
Polr1aO35134 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC17.47■□□□□ 0.39
Polr1aO35134 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC17.47■□□□□ 0.39
Polr1aO35134 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Polr1aO35134 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC17.47■□□□□ 0.39
Polr1aO35134 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Polr1aO35134 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Polr1aO35134 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Gm38344-201ENSMUST00000195306 1353 ntBASIC17.47■□□□□ 0.39
Polr1aO35134 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC17.47■□□□□ 0.39
Polr1aO35134 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Gm24279-201ENSMUST00000104236 131 ntBASIC17.47■□□□□ 0.39
Polr1aO35134 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Polr1aO35134 Gm25288-201ENSMUST00000122800 265 ntBASIC17.47■□□□□ 0.39
Polr1aO35134 Gm43244-201ENSMUST00000196994 1285 ntBASIC17.47■□□□□ 0.39
Polr1aO35134 Gm43547-201ENSMUST00000197729 328 ntBASIC17.47■□□□□ 0.39
Polr1aO35134 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC17.47■□□□□ 0.39
Polr1aO35134 Arhgef33-210ENSMUST00000225548 456 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms