Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Gm23596-201ENSMUST00000104304 132 ntBASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Gm11663-201ENSMUST00000117888 290 ntBASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Gm15711-201ENSMUST00000118889 535 ntBASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Gm12380-201ENSMUST00000119012 544 ntBASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfrsf11bO08712 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 Olfr582-201ENSMUST00000098212 960 ntBASIC11.71□□□□□ -0.53
Tnfrsf11bO08712 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf11bO08712 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf11bO08712 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Tnfrsf11bO08712 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf11bO08712 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf11bO08712 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Tnfrsf11bO08712 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf11bO08712 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
Tnfrsf11bO08712 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Tnfrsf11bO08712 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf11bO08712 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tnfrsf11bO08712 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.71□□□□□ -0.54
Tnfrsf11bO08712 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Gm14130-201ENSMUST00000118417 987 ntBASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Gm20495-201ENSMUST00000173902 235 ntBASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Gm7003-201ENSMUST00000195089 312 ntBASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Gm6439-201ENSMUST00000199849 862 ntBASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Gm44008-201ENSMUST00000204345 412 ntBASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tnfrsf11bO08712 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms