Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Gm38194-201ENSMUST00000194529 2211 ntBASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Gm43174-201ENSMUST00000195914 2445 ntBASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccdc180J3QNE4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Gm1826-201ENSMUST00000118646 1162 ntBASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Mup-ps29-201ENSMUST00000122281 202 ntBASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Gm6606-201ENSMUST00000193613 947 ntBASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Gm6677-201ENSMUST00000195100 441 ntBASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Gm45094-201ENSMUST00000207013 617 ntBASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Gm18210-201ENSMUST00000209001 1524 ntBASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Btrc-209ENSMUST00000224478 2194 ntBASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC20.81■□□□□ 0.92
Ccdc180J3QNE4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Gng5-ps-201ENSMUST00000120931 205 ntBASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Gm10254-201ENSMUST00000052888 867 ntBASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Gm43249-201ENSMUST00000200464 458 ntBASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Olfr692-202ENSMUST00000217827 1126 ntBASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Gm25580-201ENSMUST00000083409 327 ntBASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc180J3QNE4 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc180J3QNE4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms