Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Ccdc188F6WEU2 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC11.65□□□□□ -0.54
Ccdc188F6WEU2 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc188F6WEU2 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc188F6WEU2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc188F6WEU2 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ccdc188F6WEU2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc188F6WEU2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc188F6WEU2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc188F6WEU2 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.65□□□□□ -0.54
Ccdc188F6WEU2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc188F6WEU2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc188F6WEU2 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccdc188F6WEU2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.65□□□□□ -0.55
Ccdc188F6WEU2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccdc188F6WEU2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.65□□□□□ -0.55
Ccdc188F6WEU2 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccdc188F6WEU2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccdc188F6WEU2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Gm27149-201ENSMUST00000184716 1266 ntBASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Gm21631-201ENSMUST00000195041 754 ntBASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Gm9523-201ENSMUST00000199146 1159 ntBASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Gm9619-201ENSMUST00000211587 762 ntBASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc188F6WEU2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gm8601-201ENSMUST00000182096 909 ntBASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gm32102-201ENSMUST00000196885 241 ntBASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gm42908-201ENSMUST00000197508 870 ntBASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gm44420-201ENSMUST00000203669 490 ntBASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gm44173-201ENSMUST00000204316 132 ntBASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gm18621-201ENSMUST00000222677 679 ntBASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 AC163646.3-201ENSMUST00000228879 772 ntBASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.63□□□□□ -0.55
Ccdc188F6WEU2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms