Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccdc149F6V035 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc149F6V035 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc149F6V035 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.78□□□□□ -0.52
Ccdc149F6V035 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ccdc149F6V035 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.78□□□□□ -0.52
Ccdc149F6V035 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc149F6V035 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ccdc149F6V035 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc149F6V035 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.78□□□□□ -0.52
Ccdc149F6V035 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc149F6V035 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.78□□□□□ -0.52
Ccdc149F6V035 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc149F6V035 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.78□□□□□ -0.52
Ccdc149F6V035 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc149F6V035 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.78□□□□□ -0.52
Ccdc149F6V035 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccdc149F6V035 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc149F6V035 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Ccdc149F6V035 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc149F6V035 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ccdc149F6V035 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.77□□□□□ -0.52
Ccdc149F6V035 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Ccdc149F6V035 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.77□□□□□ -0.52
Ccdc149F6V035 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Gm44158-201ENSMUST00000203881 505 ntBASIC11.77□□□□□ -0.53
Ccdc149F6V035 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Gm45594-201ENSMUST00000211717 241 ntBASIC11.77□□□□□ -0.53
Ccdc149F6V035 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.77□□□□□ -0.53
Ccdc149F6V035 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.77□□□□□ -0.53
Ccdc149F6V035 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.77□□□□□ -0.53
Ccdc149F6V035 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ccdc149F6V035 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.76□□□□□ -0.53
Ccdc149F6V035 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Matn2-203ENSMUST00000226766 3252 ntBASIC11.76□□□□□ -0.53
Ccdc149F6V035 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Gm26134-201ENSMUST00000178484 110 ntBASIC11.76□□□□□ -0.53
Ccdc149F6V035 Gm8531-201ENSMUST00000188319 893 ntBASIC11.76□□□□□ -0.53
Ccdc149F6V035 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.76□□□□□ -0.53
Ccdc149F6V035 Gm37826-201ENSMUST00000195329 322 ntBASIC11.76□□□□□ -0.53
Ccdc149F6V035 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.76□□□□□ -0.53
Ccdc149F6V035 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms