Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Gm24398-201ENSMUST00000157870 109 ntBASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Gm8492-201ENSMUST00000182375 987 ntBASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.45□□□□□ -0.58
Srp54bE9PXC0 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.45□□□□□ -0.58
Srp54bE9PXC0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Srp54bE9PXC0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gm12247-201ENSMUST00000117585 670 ntBASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gm13937-201ENSMUST00000121000 988 ntBASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Mir6958-201ENSMUST00000184207 73 ntBASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gm7504-201ENSMUST00000201449 424 ntBASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gm23105-201ENSMUST00000083719 134 ntBASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Srp54bE9PXC0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Gm37028-201ENSMUST00000194276 107 ntBASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Srp54bE9PXC0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms