Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
Gm4559A4IF42 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
Gm4559A4IF42 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC2.54□□□□□ -2
Gm4559A4IF42 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.54□□□□□ -2
Gm4559A4IF42 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Gm4559A4IF42 Gm22251-201ENSMUST00000083216 107 ntBASIC2.54□□□□□ -2
Gm4559A4IF42 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC2.54□□□□□ -2
Gm4559A4IF42 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 AC154314.2-201ENSMUST00000223677 3502 ntBASIC2.54□□□□□ -2
Gm4559A4IF42 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Gm4559A4IF42 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC2.54□□□□□ -2
Gm4559A4IF42 Gm45415-201ENSMUST00000209644 2074 ntBASIC2.54□□□□□ -2
Gm4559A4IF42 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC2.54□□□□□ -2
Gm4559A4IF42 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Gm4559A4IF42 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Gm10388-201ENSMUST00000205001 2936 ntBASIC2.54□□□□□ -2
Gm4559A4IF42 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Gm37003-201ENSMUST00000194702 2827 ntBASIC2.54□□□□□ -2
Gm4559A4IF42 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Trim21-201ENSMUST00000033264 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Gm4559A4IF42 Gm38327-201ENSMUST00000195852 1755 ntBASIC2.54□□□□□ -2
Gm4559A4IF42 Gm18913-201ENSMUST00000204311 1789 ntBASIC2.54□□□□□ -2
Gm4559A4IF42 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Gm4559A4IF42 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC2.54□□□□□ -2
Gm4559A4IF42 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Gm4559A4IF42 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.54□□□□□ -2
Gm4559A4IF42 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Gm4559A4IF42 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Gm4559A4IF42 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
Gm4559A4IF42 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC2.53□□□□□ -2
Gm4559A4IF42 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Gm4559A4IF42 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Gm4559A4IF42 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC2.53□□□□□ -2
Gm4559A4IF42 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Gm4559A4IF42 Zfp410-203ENSMUST00000220931 1569 ntTSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Gm13041-201ENSMUST00000122323 1524 ntBASIC2.53□□□□□ -2
Gm4559A4IF42 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Ntrk2-205ENSMUST00000224402 2284 ntBASIC2.53□□□□□ -2
Gm4559A4IF42 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC2.53□□□□□ -2
Gm4559A4IF42 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
Gm4559A4IF42 Zkscan14-203ENSMUST00000198959 2243 ntBASIC2.53□□□□□ -2
Gm4559A4IF42 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Tnfrsf23-202ENSMUST00000152703 1476 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC2.53□□□□□ -2
Gm4559A4IF42 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Gm4559A4IF42 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC2.53□□□□□ -2
Gm4559A4IF42 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC2.53□□□□□ -2
Gm4559A4IF42 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Gm4559A4IF42 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Gm4559A4IF42 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms