Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm37912-201ENSMUST00000191895 3076 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 Gm6352-201ENSMUST00000203583 1134 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 AC123698.1-201ENSMUST00000227090 402 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.31□□□□□ -0.92
Chd6A3KFM7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Chd6A3KFM7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC9.3□□□□□ -0.92
Chd6A3KFM7 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Gm6758-201ENSMUST00000119643 1055 ntBASIC9.3□□□□□ -0.92
Chd6A3KFM7 Gm15727-201ENSMUST00000122416 437 ntBASIC9.3□□□□□ -0.92
Chd6A3KFM7 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
Chd6A3KFM7 2010009K17Rik-201ENSMUST00000186977 567 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC9.3□□□□□ -0.92
Chd6A3KFM7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC9.3□□□□□ -0.92
Chd6A3KFM7 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Gm4891-201ENSMUST00000182279 912 ntBASIC9.3□□□□□ -0.92
Chd6A3KFM7 Gm7516-201ENSMUST00000186198 706 ntBASIC9.3□□□□□ -0.92
Chd6A3KFM7 Gm37597-201ENSMUST00000191853 382 ntBASIC9.3□□□□□ -0.92
Chd6A3KFM7 Ighv1-8-201ENSMUST00000192236 293 ntBASIC9.3□□□□□ -0.92
Chd6A3KFM7 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Chd6A3KFM7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.29□□□□□ -0.92
Chd6A3KFM7 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm13071-201ENSMUST00000122237 376 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm28746-201ENSMUST00000187453 380 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm37858-201ENSMUST00000192759 1231 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm42732-201ENSMUST00000202887 1197 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm22341-201ENSMUST00000083775 129 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC9.29□□□□□ -0.92
Chd6A3KFM7 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm25770-201ENSMUST00000158566 115 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm29272-201ENSMUST00000185476 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm21919-201ENSMUST00000185653 696 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm28446-201ENSMUST00000186508 694 ntBASIC9.29□□□□□ -0.92
Chd6A3KFM7 Gm28680-201ENSMUST00000186743 480 ntBASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms