Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
Upk1bQ9Z2C6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1bQ9Z2C6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Upk1bQ9Z2C6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1bQ9Z2C6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.95■□□□□ 0.62
Upk1bQ9Z2C6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1bQ9Z2C6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1bQ9Z2C6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.95■□□□□ 0.62
Upk1bQ9Z2C6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1bQ9Z2C6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1bQ9Z2C6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk1bQ9Z2C6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Upk1bQ9Z2C6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk1bQ9Z2C6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk1bQ9Z2C6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk1bQ9Z2C6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.94■□□□□ 0.62
Upk1bQ9Z2C6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.94■□□□□ 0.62
Upk1bQ9Z2C6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk1bQ9Z2C6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Upk1bQ9Z2C6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk1bQ9Z2C6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Upk1bQ9Z2C6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk1bQ9Z2C6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk1bQ9Z2C6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk1bQ9Z2C6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Upk1bQ9Z2C6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk1bQ9Z2C6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk1bQ9Z2C6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk1bQ9Z2C6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1bQ9Z2C6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1bQ9Z2C6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1bQ9Z2C6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1bQ9Z2C6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1bQ9Z2C6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Upk1bQ9Z2C6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.92■□□□□ 0.62
Upk1bQ9Z2C6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1bQ9Z2C6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1bQ9Z2C6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1bQ9Z2C6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Upk1bQ9Z2C6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk1bQ9Z2C6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1bQ9Z2C6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.91■□□□□ 0.62
Upk1bQ9Z2C6 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.91■□□□□ 0.62
Upk1bQ9Z2C6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1bQ9Z2C6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1bQ9Z2C6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1bQ9Z2C6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Upk1bQ9Z2C6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk1bQ9Z2C6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk1bQ9Z2C6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Upk1bQ9Z2C6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.9■□□□□ 0.62
Upk1bQ9Z2C6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Upk1bQ9Z2C6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Upk1bQ9Z2C6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk1bQ9Z2C6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk1bQ9Z2C6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Upk1bQ9Z2C6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk1bQ9Z2C6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk1bQ9Z2C6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk1bQ9Z2C6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk1bQ9Z2C6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk1bQ9Z2C6 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.87■□□□□ 0.61
Upk1bQ9Z2C6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upk1bQ9Z2C6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Upk1bQ9Z2C6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upk1bQ9Z2C6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upk1bQ9Z2C6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upk1bQ9Z2C6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upk1bQ9Z2C6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upk1bQ9Z2C6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upk1bQ9Z2C6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk1bQ9Z2C6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms