Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cldn9Q9Z0S7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cldn9Q9Z0S7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cldn9Q9Z0S7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cldn9Q9Z0S7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.68■□□□□ 0.74
Cldn9Q9Z0S7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn9Q9Z0S7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.68■□□□□ 0.74
Cldn9Q9Z0S7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn9Q9Z0S7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn9Q9Z0S7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn9Q9Z0S7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn9Q9Z0S7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.67■□□□□ 0.74
Cldn9Q9Z0S7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.67■□□□□ 0.74
Cldn9Q9Z0S7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cldn9Q9Z0S7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.67■□□□□ 0.74
Cldn9Q9Z0S7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cldn9Q9Z0S7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn9Q9Z0S7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn9Q9Z0S7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn9Q9Z0S7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn9Q9Z0S7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
Cldn9Q9Z0S7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.66■□□□□ 0.74
Cldn9Q9Z0S7 Gm40881-201ENSMUST00000223397 166 ntBASIC19.66■□□□□ 0.74
Cldn9Q9Z0S7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn9Q9Z0S7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn9Q9Z0S7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cldn9Q9Z0S7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Cldn9Q9Z0S7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn9Q9Z0S7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn9Q9Z0S7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn9Q9Z0S7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn9Q9Z0S7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn9Q9Z0S7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn9Q9Z0S7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn9Q9Z0S7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn9Q9Z0S7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cldn9Q9Z0S7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cldn9Q9Z0S7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn9Q9Z0S7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.64■□□□□ 0.73
Cldn9Q9Z0S7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn9Q9Z0S7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn9Q9Z0S7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cldn9Q9Z0S7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Gm15820-201ENSMUST00000201566 728 ntBASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn9Q9Z0S7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.62■□□□□ 0.73
Cldn9Q9Z0S7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn9Q9Z0S7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Cldn9Q9Z0S7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cldn9Q9Z0S7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn9Q9Z0S7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cldn9Q9Z0S7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.62■□□□□ 0.73
Cldn9Q9Z0S7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cldn9Q9Z0S7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cldn9Q9Z0S7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn9Q9Z0S7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn9Q9Z0S7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn9Q9Z0S7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn9Q9Z0S7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn9Q9Z0S7 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.61■□□□□ 0.73
Cldn9Q9Z0S7 Gm5812-201ENSMUST00000061073 957 ntBASIC19.61■□□□□ 0.73
Cldn9Q9Z0S7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn9Q9Z0S7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn9Q9Z0S7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cldn9Q9Z0S7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn9Q9Z0S7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn9Q9Z0S7 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.6■□□□□ 0.73
Cldn9Q9Z0S7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn9Q9Z0S7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn9Q9Z0S7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn9Q9Z0S7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cldn9Q9Z0S7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn9Q9Z0S7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.6■□□□□ 0.73
Cldn9Q9Z0S7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn9Q9Z0S7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn9Q9Z0S7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn9Q9Z0S7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn9Q9Z0S7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn9Q9Z0S7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn9Q9Z0S7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn9Q9Z0S7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn9Q9Z0S7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn9Q9Z0S7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn9Q9Z0S7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn9Q9Z0S7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn9Q9Z0S7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn9Q9Z0S7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn9Q9Z0S7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms