Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cr1Q9Z0D9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cr1Q9Z0D9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cr1Q9Z0D9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cr1Q9Z0D9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cr1Q9Z0D9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cr1Q9Z0D9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cx3cr1Q9Z0D9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cx3cr1Q9Z0D9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cr1Q9Z0D9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cr1Q9Z0D9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cx3cr1Q9Z0D9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
Cx3cr1Q9Z0D9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cr1Q9Z0D9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cx3cr1Q9Z0D9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cx3cr1Q9Z0D9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cx3cr1Q9Z0D9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cx3cr1Q9Z0D9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cx3cr1Q9Z0D9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cx3cr1Q9Z0D9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cr1Q9Z0D9 Iqck-206ENSMUST00000208658 2891 ntBASIC17.26■□□□□ 0.35
Cx3cr1Q9Z0D9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cx3cr1Q9Z0D9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cr1Q9Z0D9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.26■□□□□ 0.35
Cx3cr1Q9Z0D9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Cx3cr1Q9Z0D9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cr1Q9Z0D9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cx3cr1Q9Z0D9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cr1Q9Z0D9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cr1Q9Z0D9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cx3cr1Q9Z0D9 Golph3-202ENSMUST00000226517 2359 ntBASIC17.25■□□□□ 0.35
Cx3cr1Q9Z0D9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cx3cr1Q9Z0D9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.25■□□□□ 0.35
Cx3cr1Q9Z0D9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.25■□□□□ 0.35
Cx3cr1Q9Z0D9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cx3cr1Q9Z0D9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cx3cr1Q9Z0D9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cx3cr1Q9Z0D9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cx3cr1Q9Z0D9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.25■□□□□ 0.35
Cx3cr1Q9Z0D9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.25■□□□□ 0.35
Cx3cr1Q9Z0D9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cx3cr1Q9Z0D9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cx3cr1Q9Z0D9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cx3cr1Q9Z0D9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cx3cr1Q9Z0D9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cx3cr1Q9Z0D9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cx3cr1Q9Z0D9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cx3cr1Q9Z0D9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cx3cr1Q9Z0D9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cx3cr1Q9Z0D9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cx3cr1Q9Z0D9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cx3cr1Q9Z0D9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cx3cr1Q9Z0D9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cx3cr1Q9Z0D9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cx3cr1Q9Z0D9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.23■□□□□ 0.35
Cx3cr1Q9Z0D9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.23■□□□□ 0.35
Cx3cr1Q9Z0D9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cx3cr1Q9Z0D9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.23■□□□□ 0.35
Cx3cr1Q9Z0D9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cx3cr1Q9Z0D9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cx3cr1Q9Z0D9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cx3cr1Q9Z0D9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cx3cr1Q9Z0D9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cx3cr1Q9Z0D9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cx3cr1Q9Z0D9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.22■□□□□ 0.35
Cx3cr1Q9Z0D9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cx3cr1Q9Z0D9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cx3cr1Q9Z0D9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cx3cr1Q9Z0D9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cx3cr1Q9Z0D9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cx3cr1Q9Z0D9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cx3cr1Q9Z0D9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cx3cr1Q9Z0D9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cx3cr1Q9Z0D9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.21■□□□□ 0.35
Cx3cr1Q9Z0D9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cx3cr1Q9Z0D9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Cx3cr1Q9Z0D9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cx3cr1Q9Z0D9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cx3cr1Q9Z0D9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cx3cr1Q9Z0D9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cx3cr1Q9Z0D9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cx3cr1Q9Z0D9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cx3cr1Q9Z0D9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cx3cr1Q9Z0D9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cx3cr1Q9Z0D9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cx3cr1Q9Z0D9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cx3cr1Q9Z0D9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cx3cr1Q9Z0D9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms