Protein–RNA interactions for Protein: Q9WV80

Snx1, Sorting nexin-1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx1Q9WV80 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx1Q9WV80 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx1Q9WV80 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Snx1Q9WV80 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.03■□□□□ 0.96
Snx1Q9WV80 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.03■□□□□ 0.96
Snx1Q9WV80 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Snx1Q9WV80 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx1Q9WV80 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Snx1Q9WV80 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Snx1Q9WV80 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snx1Q9WV80 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx1Q9WV80 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx1Q9WV80 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx1Q9WV80 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx1Q9WV80 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Snx1Q9WV80 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx1Q9WV80 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.02■□□□□ 0.96
Snx1Q9WV80 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.02■□□□□ 0.96
Snx1Q9WV80 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx1Q9WV80 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snx1Q9WV80 Golph3-202ENSMUST00000226517 2359 ntBASIC21.02■□□□□ 0.96
Snx1Q9WV80 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Snx1Q9WV80 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Snx1Q9WV80 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snx1Q9WV80 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snx1Q9WV80 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.01■□□□□ 0.95
Snx1Q9WV80 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Snx1Q9WV80 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Snx1Q9WV80 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
Snx1Q9WV80 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx1Q9WV80 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx1Q9WV80 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21■□□□□ 0.95
Snx1Q9WV80 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21■□□□□ 0.95
Snx1Q9WV80 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx1Q9WV80 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx1Q9WV80 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21■□□□□ 0.95
Snx1Q9WV80 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx1Q9WV80 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21■□□□□ 0.95
Snx1Q9WV80 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Snx1Q9WV80 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snx1Q9WV80 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Snx1Q9WV80 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snx1Q9WV80 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snx1Q9WV80 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Snx1Q9WV80 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Snx1Q9WV80 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.99■□□□□ 0.95
Snx1Q9WV80 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.99■□□□□ 0.95
Snx1Q9WV80 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Snx1Q9WV80 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snx1Q9WV80 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snx1Q9WV80 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snx1Q9WV80 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snx1Q9WV80 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snx1Q9WV80 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Snx1Q9WV80 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Snx1Q9WV80 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Snx1Q9WV80 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Snx1Q9WV80 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Snx1Q9WV80 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Snx1Q9WV80 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Snx1Q9WV80 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.98■□□□□ 0.95
Snx1Q9WV80 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Snx1Q9WV80 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.97■□□□□ 0.95
Snx1Q9WV80 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.97■□□□□ 0.95
Snx1Q9WV80 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Snx1Q9WV80 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snx1Q9WV80 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snx1Q9WV80 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snx1Q9WV80 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snx1Q9WV80 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snx1Q9WV80 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.97■□□□□ 0.95
Snx1Q9WV80 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snx1Q9WV80 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snx1Q9WV80 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snx1Q9WV80 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.96■□□□□ 0.95
Snx1Q9WV80 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Snx1Q9WV80 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snx1Q9WV80 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snx1Q9WV80 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snx1Q9WV80 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snx1Q9WV80 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Snx1Q9WV80 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snx1Q9WV80 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snx1Q9WV80 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx1Q9WV80 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Snx1Q9WV80 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx1Q9WV80 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx1Q9WV80 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx1Q9WV80 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Snx1Q9WV80 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snx1Q9WV80 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Snx1Q9WV80 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.94■□□□□ 0.94
Snx1Q9WV80 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Snx1Q9WV80 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Snx1Q9WV80 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Snx1Q9WV80 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.94■□□□□ 0.94
Snx1Q9WV80 Gm12366-201ENSMUST00000121722 873 ntBASIC20.94■□□□□ 0.94
Snx1Q9WV80 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.94■□□□□ 0.94
Snx1Q9WV80 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Snx1Q9WV80 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms