Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Golph3-202ENSMUST00000226517 2359 ntBASIC20.83■□□□□ 0.93
Clcn2Q9R0A1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn2Q9R0A1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn2Q9R0A1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Clcn2Q9R0A1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn2Q9R0A1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn2Q9R0A1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn2Q9R0A1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.83■□□□□ 0.93
Clcn2Q9R0A1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn2Q9R0A1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn2Q9R0A1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn2Q9R0A1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn2Q9R0A1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Clcn2Q9R0A1 Iqck-206ENSMUST00000208658 2891 ntBASIC20.83■□□□□ 0.92
Clcn2Q9R0A1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.82■□□□□ 0.92
Clcn2Q9R0A1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Clcn2Q9R0A1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn2Q9R0A1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn2Q9R0A1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn2Q9R0A1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn2Q9R0A1 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.82■□□□□ 0.92
Clcn2Q9R0A1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn2Q9R0A1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn2Q9R0A1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn2Q9R0A1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn2Q9R0A1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Clcn2Q9R0A1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn2Q9R0A1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.8■□□□□ 0.92
Clcn2Q9R0A1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Clcn2Q9R0A1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn2Q9R0A1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.8■□□□□ 0.92
Clcn2Q9R0A1 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.8■□□□□ 0.92
Clcn2Q9R0A1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.8■□□□□ 0.92
Clcn2Q9R0A1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn2Q9R0A1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn2Q9R0A1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn2Q9R0A1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Clcn2Q9R0A1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Clcn2Q9R0A1 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.79■□□□□ 0.92
Clcn2Q9R0A1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn2Q9R0A1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn2Q9R0A1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn2Q9R0A1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Clcn2Q9R0A1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Clcn2Q9R0A1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Clcn2Q9R0A1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn2Q9R0A1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn2Q9R0A1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Clcn2Q9R0A1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn2Q9R0A1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn2Q9R0A1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.78■□□□□ 0.92
Clcn2Q9R0A1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.78■□□□□ 0.92
Clcn2Q9R0A1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn2Q9R0A1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn2Q9R0A1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Clcn2Q9R0A1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clcn2Q9R0A1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clcn2Q9R0A1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clcn2Q9R0A1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clcn2Q9R0A1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Clcn2Q9R0A1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Clcn2Q9R0A1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn2Q9R0A1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Clcn2Q9R0A1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn2Q9R0A1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Clcn2Q9R0A1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Clcn2Q9R0A1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.75■□□□□ 0.91
Clcn2Q9R0A1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Clcn2Q9R0A1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.75■□□□□ 0.91
Clcn2Q9R0A1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Clcn2Q9R0A1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn2Q9R0A1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clcn2Q9R0A1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn2Q9R0A1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn2Q9R0A1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Clcn2Q9R0A1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clcn2Q9R0A1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.74■□□□□ 0.91
Clcn2Q9R0A1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms