Protein–RNA interactions for Protein: Q9QX15

Clca3a1, Calcium-activated chloride channel regulator 3A-1, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a1Q9QX15 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clca3a1Q9QX15 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clca3a1Q9QX15 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clca3a1Q9QX15 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clca3a1Q9QX15 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clca3a1Q9QX15 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clca3a1Q9QX15 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clca3a1Q9QX15 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clca3a1Q9QX15 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Clca3a1Q9QX15 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca3a1Q9QX15 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clca3a1Q9QX15 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca3a1Q9QX15 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca3a1Q9QX15 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca3a1Q9QX15 Gm10399-202ENSMUST00000202768 748 ntBASIC19.2■□□□□ 0.66
Clca3a1Q9QX15 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca3a1Q9QX15 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca3a1Q9QX15 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clca3a1Q9QX15 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clca3a1Q9QX15 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca3a1Q9QX15 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca3a1Q9QX15 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca3a1Q9QX15 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca3a1Q9QX15 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.19■□□□□ 0.66
Clca3a1Q9QX15 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca3a1Q9QX15 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Clca3a1Q9QX15 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca3a1Q9QX15 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca3a1Q9QX15 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clca3a1Q9QX15 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.19■□□□□ 0.66
Clca3a1Q9QX15 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca3a1Q9QX15 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca3a1Q9QX15 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.18■□□□□ 0.66
Clca3a1Q9QX15 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Clca3a1Q9QX15 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca3a1Q9QX15 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Clca3a1Q9QX15 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca3a1Q9QX15 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca3a1Q9QX15 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.18■□□□□ 0.66
Clca3a1Q9QX15 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clca3a1Q9QX15 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clca3a1Q9QX15 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Clca3a1Q9QX15 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca3a1Q9QX15 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca3a1Q9QX15 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.17■□□□□ 0.66
Clca3a1Q9QX15 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clca3a1Q9QX15 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Gm5812-201ENSMUST00000061073 957 ntBASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clca3a1Q9QX15 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca3a1Q9QX15 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Clca3a1Q9QX15 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.15■□□□□ 0.66
Clca3a1Q9QX15 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clca3a1Q9QX15 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Clca3a1Q9QX15 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Clca3a1Q9QX15 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Clca3a1Q9QX15 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clca3a1Q9QX15 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca3a1Q9QX15 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca3a1Q9QX15 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.14■□□□□ 0.65
Clca3a1Q9QX15 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca3a1Q9QX15 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Clca3a1Q9QX15 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca3a1Q9QX15 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca3a1Q9QX15 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca3a1Q9QX15 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clca3a1Q9QX15 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clca3a1Q9QX15 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clca3a1Q9QX15 Golph3-202ENSMUST00000226517 2359 ntBASIC19.13■□□□□ 0.65
Clca3a1Q9QX15 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clca3a1Q9QX15 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.13■□□□□ 0.65
Clca3a1Q9QX15 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clca3a1Q9QX15 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.13■□□□□ 0.65
Clca3a1Q9QX15 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clca3a1Q9QX15 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clca3a1Q9QX15 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clca3a1Q9QX15 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clca3a1Q9QX15 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clca3a1Q9QX15 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Clca3a1Q9QX15 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clca3a1Q9QX15 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clca3a1Q9QX15 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clca3a1Q9QX15 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms