Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.68■□□□□ 0.58
Prg4Q9JM99 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Prg4Q9JM99 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.67■□□□□ 0.58
Prg4Q9JM99 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prg4Q9JM99 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prg4Q9JM99 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prg4Q9JM99 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prg4Q9JM99 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prg4Q9JM99 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.67■□□□□ 0.58
Prg4Q9JM99 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Prg4Q9JM99 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.67■□□□□ 0.58
Prg4Q9JM99 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prg4Q9JM99 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Prg4Q9JM99 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Prg4Q9JM99 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prg4Q9JM99 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Prg4Q9JM99 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Prg4Q9JM99 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.66■□□□□ 0.58
Prg4Q9JM99 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.66■□□□□ 0.58
Prg4Q9JM99 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.66■□□□□ 0.58
Prg4Q9JM99 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prg4Q9JM99 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prg4Q9JM99 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prg4Q9JM99 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.65■□□□□ 0.58
Prg4Q9JM99 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.65■□□□□ 0.58
Prg4Q9JM99 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Prg4Q9JM99 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prg4Q9JM99 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Prg4Q9JM99 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prg4Q9JM99 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Prg4Q9JM99 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prg4Q9JM99 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prg4Q9JM99 Gm27454-201ENSMUST00000185090 204 ntBASIC18.65■□□□□ 0.58
Prg4Q9JM99 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prg4Q9JM99 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Prg4Q9JM99 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Prg4Q9JM99 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Prg4Q9JM99 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Prg4Q9JM99 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prg4Q9JM99 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.64■□□□□ 0.57
Prg4Q9JM99 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Prg4Q9JM99 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prg4Q9JM99 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prg4Q9JM99 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Prg4Q9JM99 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prg4Q9JM99 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prg4Q9JM99 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prg4Q9JM99 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prg4Q9JM99 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prg4Q9JM99 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Prg4Q9JM99 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prg4Q9JM99 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prg4Q9JM99 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prg4Q9JM99 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prg4Q9JM99 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Prg4Q9JM99 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.62■□□□□ 0.57
Prg4Q9JM99 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prg4Q9JM99 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.62■□□□□ 0.57
Prg4Q9JM99 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prg4Q9JM99 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prg4Q9JM99 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prg4Q9JM99 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prg4Q9JM99 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prg4Q9JM99 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prg4Q9JM99 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.6■□□□□ 0.57
Prg4Q9JM99 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
Prg4Q9JM99 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.6■□□□□ 0.57
Prg4Q9JM99 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
Prg4Q9JM99 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prg4Q9JM99 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prg4Q9JM99 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prg4Q9JM99 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prg4Q9JM99 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prg4Q9JM99 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prg4Q9JM99 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prg4Q9JM99 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms