Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Gm9959-201ENSMUST00000068277 390 ntBASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sec61a2Q9JLR1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sec61a2Q9JLR1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.27■□□□□ 0.52
Sec61a2Q9JLR1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sec61a2Q9JLR1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sec61a2Q9JLR1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sec61a2Q9JLR1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Sec61a2Q9JLR1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sec61a2Q9JLR1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sec61a2Q9JLR1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sec61a2Q9JLR1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.26■□□□□ 0.51
Sec61a2Q9JLR1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.26■□□□□ 0.51
Sec61a2Q9JLR1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.26■□□□□ 0.51
Sec61a2Q9JLR1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sec61a2Q9JLR1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sec61a2Q9JLR1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sec61a2Q9JLR1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sec61a2Q9JLR1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sec61a2Q9JLR1 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Gm14117-201ENSMUST00000122417 843 ntBASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sec61a2Q9JLR1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a2Q9JLR1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a2Q9JLR1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a2Q9JLR1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a2Q9JLR1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a2Q9JLR1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.24■□□□□ 0.51
Sec61a2Q9JLR1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.24■□□□□ 0.51
Sec61a2Q9JLR1 Rps24-207ENSMUST00000224568 714 ntBASIC18.24■□□□□ 0.51
Sec61a2Q9JLR1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a2Q9JLR1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a2Q9JLR1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a2Q9JLR1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sec61a2Q9JLR1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Sec61a2Q9JLR1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a2Q9JLR1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a2Q9JLR1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a2Q9JLR1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a2Q9JLR1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a2Q9JLR1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sec61a2Q9JLR1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a2Q9JLR1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sec61a2Q9JLR1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Gm10399-202ENSMUST00000202768 748 ntBASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sec61a2Q9JLR1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sec61a2Q9JLR1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a2Q9JLR1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a2Q9JLR1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a2Q9JLR1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a2Q9JLR1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a2Q9JLR1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a2Q9JLR1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a2Q9JLR1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a2Q9JLR1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sec61a2Q9JLR1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms