Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.74■■□□□ 1.07
Rfx5Q9JL61 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx5Q9JL61 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx5Q9JL61 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.73■■□□□ 1.07
Rfx5Q9JL61 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx5Q9JL61 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx5Q9JL61 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.73■■□□□ 1.07
Rfx5Q9JL61 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx5Q9JL61 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx5Q9JL61 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx5Q9JL61 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx5Q9JL61 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx5Q9JL61 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx5Q9JL61 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx5Q9JL61 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rfx5Q9JL61 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfx5Q9JL61 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.72■■□□□ 1.07
Rfx5Q9JL61 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfx5Q9JL61 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.72■■□□□ 1.07
Rfx5Q9JL61 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Rfx5Q9JL61 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rfx5Q9JL61 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rfx5Q9JL61 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rfx5Q9JL61 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx5Q9JL61 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.71■■□□□ 1.07
Rfx5Q9JL61 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Rfx5Q9JL61 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx5Q9JL61 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx5Q9JL61 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx5Q9JL61 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx5Q9JL61 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rfx5Q9JL61 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx5Q9JL61 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.7■■□□□ 1.06
Rfx5Q9JL61 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx5Q9JL61 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rfx5Q9JL61 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.7■■□□□ 1.06
Rfx5Q9JL61 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx5Q9JL61 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx5Q9JL61 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx5Q9JL61 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx5Q9JL61 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx5Q9JL61 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.69■■□□□ 1.06
Rfx5Q9JL61 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx5Q9JL61 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx5Q9JL61 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rfx5Q9JL61 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rfx5Q9JL61 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rfx5Q9JL61 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.68■■□□□ 1.06
Rfx5Q9JL61 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.68■■□□□ 1.06
Rfx5Q9JL61 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rfx5Q9JL61 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx5Q9JL61 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx5Q9JL61 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx5Q9JL61 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx5Q9JL61 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Rfx5Q9JL61 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx5Q9JL61 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx5Q9JL61 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Rfx5Q9JL61 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Gm43530-201ENSMUST00000195920 274 ntBASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Gm13241-201ENSMUST00000094493 780 ntBASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx5Q9JL61 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx5Q9JL61 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx5Q9JL61 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.65■■□□□ 1.06
Rfx5Q9JL61 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx5Q9JL61 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx5Q9JL61 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx5Q9JL61 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rfx5Q9JL61 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Rfx5Q9JL61 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx5Q9JL61 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx5Q9JL61 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Rfx5Q9JL61 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx5Q9JL61 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.63■■□□□ 1.05
Rfx5Q9JL61 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx5Q9JL61 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx5Q9JL61 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.63■■□□□ 1.05
Rfx5Q9JL61 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx5Q9JL61 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx5Q9JL61 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx5Q9JL61 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rfx5Q9JL61 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx5Q9JL61 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx5Q9JL61 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.62■■□□□ 1.05
Rfx5Q9JL61 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx5Q9JL61 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx5Q9JL61 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.61■■□□□ 1.05
Rfx5Q9JL61 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rfx5Q9JL61 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.61■■□□□ 1.05
Rfx5Q9JL61 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms