Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk3aQ9JKX8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Upk3aQ9JKX8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.77■□□□□ 0.76
Upk3aQ9JKX8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.77■□□□□ 0.76
Upk3aQ9JKX8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Upk3aQ9JKX8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upk3aQ9JKX8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Upk3aQ9JKX8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Upk3aQ9JKX8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Upk3aQ9JKX8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
Upk3aQ9JKX8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk3aQ9JKX8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk3aQ9JKX8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk3aQ9JKX8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Upk3aQ9JKX8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Upk3aQ9JKX8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Upk3aQ9JKX8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.76■□□□□ 0.75
Upk3aQ9JKX8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
Upk3aQ9JKX8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk3aQ9JKX8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk3aQ9JKX8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Upk3aQ9JKX8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk3aQ9JKX8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk3aQ9JKX8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk3aQ9JKX8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk3aQ9JKX8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Upk3aQ9JKX8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Upk3aQ9JKX8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.75■□□□□ 0.75
Upk3aQ9JKX8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk3aQ9JKX8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk3aQ9JKX8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk3aQ9JKX8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk3aQ9JKX8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Upk3aQ9JKX8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk3aQ9JKX8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk3aQ9JKX8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk3aQ9JKX8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Upk3aQ9JKX8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Upk3aQ9JKX8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.73■□□□□ 0.75
Upk3aQ9JKX8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upk3aQ9JKX8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upk3aQ9JKX8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upk3aQ9JKX8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Upk3aQ9JKX8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upk3aQ9JKX8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upk3aQ9JKX8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Upk3aQ9JKX8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Upk3aQ9JKX8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Upk3aQ9JKX8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Gm12922-201ENSMUST00000120626 809 ntBASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Upk3aQ9JKX8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3aQ9JKX8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3aQ9JKX8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Upk3aQ9JKX8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Upk3aQ9JKX8 Gm43530-201ENSMUST00000195920 274 ntBASIC19.7■□□□□ 0.74
Upk3aQ9JKX8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3aQ9JKX8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3aQ9JKX8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3aQ9JKX8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Upk3aQ9JKX8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Upk3aQ9JKX8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms