Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rhox4bQ9JI43 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rhox4bQ9JI43 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rhox4bQ9JI43 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rhox4bQ9JI43 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rhox4bQ9JI43 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rhox4bQ9JI43 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rhox4bQ9JI43 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rhox4bQ9JI43 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rhox4bQ9JI43 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.34■□□□□ 0.21
Rhox4bQ9JI43 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rhox4bQ9JI43 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rhox4bQ9JI43 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rhox4bQ9JI43 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
Rhox4bQ9JI43 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rhox4bQ9JI43 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rhox4bQ9JI43 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Rhox4bQ9JI43 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rhox4bQ9JI43 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rhox4bQ9JI43 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rhox4bQ9JI43 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rhox4bQ9JI43 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rhox4bQ9JI43 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rhox4bQ9JI43 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rhox4bQ9JI43 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rhox4bQ9JI43 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.31■□□□□ 0.2
Rhox4bQ9JI43 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rhox4bQ9JI43 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rhox4bQ9JI43 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rhox4bQ9JI43 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rhox4bQ9JI43 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rhox4bQ9JI43 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rhox4bQ9JI43 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rhox4bQ9JI43 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rhox4bQ9JI43 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rhox4bQ9JI43 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rhox4bQ9JI43 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rhox4bQ9JI43 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Rhox4bQ9JI43 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rhox4bQ9JI43 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rhox4bQ9JI43 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rhox4bQ9JI43 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rhox4bQ9JI43 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rhox4bQ9JI43 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rhox4bQ9JI43 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rhox4bQ9JI43 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.29■□□□□ 0.2
Rhox4bQ9JI43 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rhox4bQ9JI43 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rhox4bQ9JI43 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rhox4bQ9JI43 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rhox4bQ9JI43 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.28■□□□□ 0.2
Rhox4bQ9JI43 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rhox4bQ9JI43 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rhox4bQ9JI43 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rhox4bQ9JI43 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.28■□□□□ 0.2
Rhox4bQ9JI43 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.28■□□□□ 0.2
Rhox4bQ9JI43 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.28■□□□□ 0.2
Rhox4bQ9JI43 Gm44428-201ENSMUST00000204474 874 ntBASIC16.28■□□□□ 0.2
Rhox4bQ9JI43 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rhox4bQ9JI43 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rhox4bQ9JI43 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms