Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.37■□□□□ 0.69
Vmn1r40Q9EQ46 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Vmn1r40Q9EQ46 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Vmn1r40Q9EQ46 Mir7075-201ENSMUST00000184187 82 ntBASIC19.37■□□□□ 0.69
Vmn1r40Q9EQ46 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.37■□□□□ 0.69
Vmn1r40Q9EQ46 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vmn1r40Q9EQ46 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vmn1r40Q9EQ46 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Vmn1r40Q9EQ46 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vmn1r40Q9EQ46 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vmn1r40Q9EQ46 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vmn1r40Q9EQ46 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vmn1r40Q9EQ46 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.36■□□□□ 0.69
Vmn1r40Q9EQ46 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Vmn1r40Q9EQ46 Gm6139-201ENSMUST00000079261 882 ntBASIC19.36■□□□□ 0.69
Vmn1r40Q9EQ46 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Vmn1r40Q9EQ46 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vmn1r40Q9EQ46 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r40Q9EQ46 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Vmn1r40Q9EQ46 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r40Q9EQ46 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r40Q9EQ46 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r40Q9EQ46 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Vmn1r40Q9EQ46 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r40Q9EQ46 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.35■□□□□ 0.69
Vmn1r40Q9EQ46 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vmn1r40Q9EQ46 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vmn1r40Q9EQ46 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Vmn1r40Q9EQ46 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vmn1r40Q9EQ46 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.34■□□□□ 0.69
Vmn1r40Q9EQ46 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vmn1r40Q9EQ46 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vmn1r40Q9EQ46 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vmn1r40Q9EQ46 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vmn1r40Q9EQ46 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.33■□□□□ 0.68
Vmn1r40Q9EQ46 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Vmn1r40Q9EQ46 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vmn1r40Q9EQ46 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vmn1r40Q9EQ46 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r40Q9EQ46 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r40Q9EQ46 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Vmn1r40Q9EQ46 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r40Q9EQ46 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r40Q9EQ46 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Vmn1r40Q9EQ46 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
Vmn1r40Q9EQ46 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r40Q9EQ46 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
Vmn1r40Q9EQ46 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r40Q9EQ46 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vmn1r40Q9EQ46 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r40Q9EQ46 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r40Q9EQ46 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.31■□□□□ 0.68
Vmn1r40Q9EQ46 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r40Q9EQ46 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Vmn1r40Q9EQ46 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r40Q9EQ46 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vmn1r40Q9EQ46 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.3■□□□□ 0.68
Vmn1r40Q9EQ46 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.3■□□□□ 0.68
Vmn1r40Q9EQ46 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.3■□□□□ 0.68
Vmn1r40Q9EQ46 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.3■□□□□ 0.68
Vmn1r40Q9EQ46 Gm8493-201ENSMUST00000196881 489 ntBASIC19.3■□□□□ 0.68
Vmn1r40Q9EQ46 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.3■□□□□ 0.68
Vmn1r40Q9EQ46 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r40Q9EQ46 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.3■□□□□ 0.68
Vmn1r40Q9EQ46 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r40Q9EQ46 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r40Q9EQ46 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.3■□□□□ 0.68
Vmn1r40Q9EQ46 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vmn1r40Q9EQ46 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r40Q9EQ46 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r40Q9EQ46 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r40Q9EQ46 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r40Q9EQ46 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r40Q9EQ46 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r40Q9EQ46 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Vmn1r40Q9EQ46 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Vmn1r40Q9EQ46 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r40Q9EQ46 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vmn1r40Q9EQ46 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Vmn1r40Q9EQ46 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.28■□□□□ 0.68
Vmn1r40Q9EQ46 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r40Q9EQ46 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Vmn1r40Q9EQ46 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.28■□□□□ 0.68
Vmn1r40Q9EQ46 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r40Q9EQ46 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Vmn1r40Q9EQ46 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vmn1r40Q9EQ46 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vmn1r40Q9EQ46 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vmn1r40Q9EQ46 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Vmn1r40Q9EQ46 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vmn1r40Q9EQ46 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Vmn1r40Q9EQ46 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.27■□□□□ 0.68
Vmn1r40Q9EQ46 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Vmn1r40Q9EQ46 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Vmn1r40Q9EQ46 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vmn1r40Q9EQ46 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.27■□□□□ 0.67
Vmn1r40Q9EQ46 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r40Q9EQ46 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r40Q9EQ46 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vmn1r40Q9EQ46 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms