Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Mmp1bQ9EPL6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mmp1bQ9EPL6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Mmp1bQ9EPL6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp1bQ9EPL6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp1bQ9EPL6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.93■□□□□ 0.46
Mmp1bQ9EPL6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.93■□□□□ 0.46
Mmp1bQ9EPL6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp1bQ9EPL6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp1bQ9EPL6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mmp1bQ9EPL6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Mmp1bQ9EPL6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Mmp1bQ9EPL6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Mmp1bQ9EPL6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp1bQ9EPL6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp1bQ9EPL6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Mmp1bQ9EPL6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp1bQ9EPL6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp1bQ9EPL6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp1bQ9EPL6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp1bQ9EPL6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp1bQ9EPL6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp1bQ9EPL6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp1bQ9EPL6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mmp1bQ9EPL6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp1bQ9EPL6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Mmp1bQ9EPL6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp1bQ9EPL6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp1bQ9EPL6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.91■□□□□ 0.46
Mmp1bQ9EPL6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Mmp1bQ9EPL6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp1bQ9EPL6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp1bQ9EPL6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp1bQ9EPL6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp1bQ9EPL6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp1bQ9EPL6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp1bQ9EPL6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp1bQ9EPL6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp1bQ9EPL6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.9■□□□□ 0.46
Mmp1bQ9EPL6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Mmp1bQ9EPL6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp1bQ9EPL6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Mmp1bQ9EPL6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp1bQ9EPL6 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.89■□□□□ 0.45
Mmp1bQ9EPL6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Mmp1bQ9EPL6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp1bQ9EPL6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.89■□□□□ 0.45
Mmp1bQ9EPL6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp1bQ9EPL6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp1bQ9EPL6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms