Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssmem1Q9D9Y8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Ssmem1Q9D9Y8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssmem1Q9D9Y8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssmem1Q9D9Y8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssmem1Q9D9Y8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.64■□□□□ 0.41
Ssmem1Q9D9Y8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.64■□□□□ 0.41
Ssmem1Q9D9Y8 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.64■□□□□ 0.41
Ssmem1Q9D9Y8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssmem1Q9D9Y8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssmem1Q9D9Y8 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.64■□□□□ 0.41
Ssmem1Q9D9Y8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssmem1Q9D9Y8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssmem1Q9D9Y8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssmem1Q9D9Y8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ssmem1Q9D9Y8 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.63■□□□□ 0.41
Ssmem1Q9D9Y8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.63■□□□□ 0.41
Ssmem1Q9D9Y8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ssmem1Q9D9Y8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssmem1Q9D9Y8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssmem1Q9D9Y8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssmem1Q9D9Y8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssmem1Q9D9Y8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssmem1Q9D9Y8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssmem1Q9D9Y8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ssmem1Q9D9Y8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssmem1Q9D9Y8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssmem1Q9D9Y8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssmem1Q9D9Y8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssmem1Q9D9Y8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.61■□□□□ 0.41
Ssmem1Q9D9Y8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssmem1Q9D9Y8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssmem1Q9D9Y8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssmem1Q9D9Y8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssmem1Q9D9Y8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ssmem1Q9D9Y8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssmem1Q9D9Y8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ssmem1Q9D9Y8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssmem1Q9D9Y8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssmem1Q9D9Y8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssmem1Q9D9Y8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.59■□□□□ 0.41
Ssmem1Q9D9Y8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ssmem1Q9D9Y8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssmem1Q9D9Y8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssmem1Q9D9Y8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.59■□□□□ 0.41
Ssmem1Q9D9Y8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssmem1Q9D9Y8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssmem1Q9D9Y8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ssmem1Q9D9Y8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ssmem1Q9D9Y8 Gm21956-201ENSMUST00000179946 522 ntBASIC17.58■□□□□ 0.4
Ssmem1Q9D9Y8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssmem1Q9D9Y8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssmem1Q9D9Y8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.58■□□□□ 0.4
Ssmem1Q9D9Y8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ssmem1Q9D9Y8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ssmem1Q9D9Y8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssmem1Q9D9Y8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssmem1Q9D9Y8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms