Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Echdc3Q9D7J9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Echdc3Q9D7J9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Echdc3Q9D7J9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Echdc3Q9D7J9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Echdc3Q9D7J9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
Echdc3Q9D7J9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Echdc3Q9D7J9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Echdc3Q9D7J9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Echdc3Q9D7J9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Echdc3Q9D7J9 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.8■□□□□ 0.76
Echdc3Q9D7J9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Echdc3Q9D7J9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Echdc3Q9D7J9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Echdc3Q9D7J9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Echdc3Q9D7J9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Echdc3Q9D7J9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.79■□□□□ 0.76
Echdc3Q9D7J9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Echdc3Q9D7J9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Echdc3Q9D7J9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Echdc3Q9D7J9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Echdc3Q9D7J9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Echdc3Q9D7J9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Echdc3Q9D7J9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Echdc3Q9D7J9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Echdc3Q9D7J9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Echdc3Q9D7J9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Echdc3Q9D7J9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Echdc3Q9D7J9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Echdc3Q9D7J9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Echdc3Q9D7J9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Echdc3Q9D7J9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Echdc3Q9D7J9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Echdc3Q9D7J9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Echdc3Q9D7J9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Echdc3Q9D7J9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Echdc3Q9D7J9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Echdc3Q9D7J9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Echdc3Q9D7J9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Echdc3Q9D7J9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Echdc3Q9D7J9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Echdc3Q9D7J9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Echdc3Q9D7J9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Echdc3Q9D7J9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Echdc3Q9D7J9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Echdc3Q9D7J9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Echdc3Q9D7J9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Echdc3Q9D7J9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Echdc3Q9D7J9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Echdc3Q9D7J9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Echdc3Q9D7J9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.73■□□□□ 0.75
Echdc3Q9D7J9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Echdc3Q9D7J9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Echdc3Q9D7J9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Echdc3Q9D7J9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.72■□□□□ 0.75
Echdc3Q9D7J9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Echdc3Q9D7J9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Echdc3Q9D7J9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Echdc3Q9D7J9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Echdc3Q9D7J9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Echdc3Q9D7J9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Echdc3Q9D7J9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Echdc3Q9D7J9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.71■□□□□ 0.75
Echdc3Q9D7J9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Echdc3Q9D7J9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Echdc3Q9D7J9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.71■□□□□ 0.75
Echdc3Q9D7J9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Echdc3Q9D7J9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Echdc3Q9D7J9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Echdc3Q9D7J9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Echdc3Q9D7J9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Echdc3Q9D7J9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Echdc3Q9D7J9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms