Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Upk1aQ9D132 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Upk1aQ9D132 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.45■□□□□ 0.7
Upk1aQ9D132 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Upk1aQ9D132 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Upk1aQ9D132 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Upk1aQ9D132 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk1aQ9D132 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.44■□□□□ 0.7
Upk1aQ9D132 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.44■□□□□ 0.7
Upk1aQ9D132 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk1aQ9D132 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk1aQ9D132 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk1aQ9D132 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk1aQ9D132 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk1aQ9D132 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk1aQ9D132 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Upk1aQ9D132 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Upk1aQ9D132 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Upk1aQ9D132 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk1aQ9D132 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk1aQ9D132 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk1aQ9D132 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk1aQ9D132 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Upk1aQ9D132 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk1aQ9D132 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk1aQ9D132 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Upk1aQ9D132 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.42■□□□□ 0.7
Upk1aQ9D132 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Upk1aQ9D132 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Upk1aQ9D132 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk1aQ9D132 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk1aQ9D132 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk1aQ9D132 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Upk1aQ9D132 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Upk1aQ9D132 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Upk1aQ9D132 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Upk1aQ9D132 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.41■□□□□ 0.7
Upk1aQ9D132 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Upk1aQ9D132 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Upk1aQ9D132 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.41■□□□□ 0.7
Upk1aQ9D132 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Upk1aQ9D132 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk1aQ9D132 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.4■□□□□ 0.7
Upk1aQ9D132 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.4■□□□□ 0.7
Upk1aQ9D132 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk1aQ9D132 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Upk1aQ9D132 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk1aQ9D132 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Upk1aQ9D132 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Upk1aQ9D132 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Upk1aQ9D132 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Upk1aQ9D132 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.39■□□□□ 0.69
Upk1aQ9D132 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Upk1aQ9D132 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.39■□□□□ 0.69
Upk1aQ9D132 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Upk1aQ9D132 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upk1aQ9D132 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.39■□□□□ 0.69
Upk1aQ9D132 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upk1aQ9D132 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Upk1aQ9D132 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Upk1aQ9D132 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.39■□□□□ 0.69
Upk1aQ9D132 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upk1aQ9D132 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upk1aQ9D132 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upk1aQ9D132 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Upk1aQ9D132 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.38■□□□□ 0.69
Upk1aQ9D132 Gm12366-201ENSMUST00000121722 873 ntBASIC19.38■□□□□ 0.69
Upk1aQ9D132 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.38■□□□□ 0.69
Upk1aQ9D132 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.38■□□□□ 0.69
Upk1aQ9D132 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.38■□□□□ 0.69
Upk1aQ9D132 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upk1aQ9D132 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upk1aQ9D132 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Upk1aQ9D132 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upk1aQ9D132 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Upk1aQ9D132 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.38■□□□□ 0.69
Upk1aQ9D132 Gm5786-201ENSMUST00000085368 882 ntBASIC19.38■□□□□ 0.69
Upk1aQ9D132 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1aQ9D132 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1aQ9D132 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1aQ9D132 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1aQ9D132 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Upk1aQ9D132 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1aQ9D132 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Upk1aQ9D132 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.36■□□□□ 0.69
Upk1aQ9D132 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.36■□□□□ 0.69
Upk1aQ9D132 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1aQ9D132 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.36■□□□□ 0.69
Upk1aQ9D132 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1aQ9D132 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1aQ9D132 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.36■□□□□ 0.69
Upk1aQ9D132 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Upk1aQ9D132 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1aQ9D132 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1aQ9D132 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Upk1aQ9D132 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1aQ9D132 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Upk1aQ9D132 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Upk1aQ9D132 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.35■□□□□ 0.69
Upk1aQ9D132 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms