Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Snf8Q9CZ28 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Snf8Q9CZ28 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Snf8Q9CZ28 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.04■□□□□ 0.96
Snf8Q9CZ28 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Snf8Q9CZ28 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Snf8Q9CZ28 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.04■□□□□ 0.96
Snf8Q9CZ28 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Snf8Q9CZ28 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Snf8Q9CZ28 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Snf8Q9CZ28 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snf8Q9CZ28 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Snf8Q9CZ28 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.03■□□□□ 0.96
Snf8Q9CZ28 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.03■□□□□ 0.96
Snf8Q9CZ28 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.03■□□□□ 0.96
Snf8Q9CZ28 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Snf8Q9CZ28 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snf8Q9CZ28 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Snf8Q9CZ28 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snf8Q9CZ28 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snf8Q9CZ28 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snf8Q9CZ28 Gm10420-201ENSMUST00000121713 882 ntBASIC21.02■□□□□ 0.96
Snf8Q9CZ28 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.02■□□□□ 0.96
Snf8Q9CZ28 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.02■□□□□ 0.96
Snf8Q9CZ28 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Snf8Q9CZ28 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snf8Q9CZ28 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Snf8Q9CZ28 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Snf8Q9CZ28 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snf8Q9CZ28 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Snf8Q9CZ28 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Snf8Q9CZ28 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snf8Q9CZ28 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snf8Q9CZ28 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snf8Q9CZ28 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Snf8Q9CZ28 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Snf8Q9CZ28 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snf8Q9CZ28 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snf8Q9CZ28 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Snf8Q9CZ28 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Snf8Q9CZ28 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snf8Q9CZ28 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Snf8Q9CZ28 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snf8Q9CZ28 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snf8Q9CZ28 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Snf8Q9CZ28 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21■□□□□ 0.95
Snf8Q9CZ28 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snf8Q9CZ28 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Snf8Q9CZ28 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snf8Q9CZ28 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21■□□□□ 0.95
Snf8Q9CZ28 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Snf8Q9CZ28 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snf8Q9CZ28 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snf8Q9CZ28 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snf8Q9CZ28 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Snf8Q9CZ28 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snf8Q9CZ28 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Snf8Q9CZ28 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Snf8Q9CZ28 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Snf8Q9CZ28 Cap2-205ENSMUST00000225824 1634 ntBASIC20.98■□□□□ 0.95
Snf8Q9CZ28 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Snf8Q9CZ28 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Snf8Q9CZ28 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Snf8Q9CZ28 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Snf8Q9CZ28 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Snf8Q9CZ28 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.97■□□□□ 0.95
Snf8Q9CZ28 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Snf8Q9CZ28 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Snf8Q9CZ28 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Snf8Q9CZ28 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Snf8Q9CZ28 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snf8Q9CZ28 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snf8Q9CZ28 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Snf8Q9CZ28 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Snf8Q9CZ28 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snf8Q9CZ28 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Snf8Q9CZ28 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snf8Q9CZ28 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Snf8Q9CZ28 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snf8Q9CZ28 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snf8Q9CZ28 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Snf8Q9CZ28 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Snf8Q9CZ28 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Snf8Q9CZ28 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Snf8Q9CZ28 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Snf8Q9CZ28 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Snf8Q9CZ28 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Snf8Q9CZ28 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms