Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chd1lQ9CXF7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Chd1lQ9CXF7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chd1lQ9CXF7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chd1lQ9CXF7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
Chd1lQ9CXF7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chd1lQ9CXF7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Chd1lQ9CXF7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chd1lQ9CXF7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chd1lQ9CXF7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chd1lQ9CXF7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chd1lQ9CXF7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chd1lQ9CXF7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chd1lQ9CXF7 Gm5112-201ENSMUST00000204407 2368 ntBASIC23.11■■□□□ 1.29
Chd1lQ9CXF7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chd1lQ9CXF7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Chd1lQ9CXF7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Chd1lQ9CXF7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Chd1lQ9CXF7 Gm9806-201ENSMUST00000051080 552 ntBASIC23.1■■□□□ 1.29
Chd1lQ9CXF7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC23.1■■□□□ 1.29
Chd1lQ9CXF7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Chd1lQ9CXF7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chd1lQ9CXF7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.09■■□□□ 1.29
Chd1lQ9CXF7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.09■■□□□ 1.29
Chd1lQ9CXF7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chd1lQ9CXF7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Chd1lQ9CXF7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chd1lQ9CXF7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chd1lQ9CXF7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chd1lQ9CXF7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.08■■□□□ 1.29
Chd1lQ9CXF7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chd1lQ9CXF7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chd1lQ9CXF7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chd1lQ9CXF7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Chd1lQ9CXF7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
Chd1lQ9CXF7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Chd1lQ9CXF7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Chd1lQ9CXF7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC23.07■■□□□ 1.28
Chd1lQ9CXF7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Chd1lQ9CXF7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Chd1lQ9CXF7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Chd1lQ9CXF7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Chd1lQ9CXF7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Chd1lQ9CXF7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Chd1lQ9CXF7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chd1lQ9CXF7 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.06■■□□□ 1.28
Chd1lQ9CXF7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chd1lQ9CXF7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Chd1lQ9CXF7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chd1lQ9CXF7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chd1lQ9CXF7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Chd1lQ9CXF7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Chd1lQ9CXF7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Chd1lQ9CXF7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Chd1lQ9CXF7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC23.04■■□□□ 1.28
Chd1lQ9CXF7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Chd1lQ9CXF7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Chd1lQ9CXF7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Chd1lQ9CXF7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Chd1lQ9CXF7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Chd1lQ9CXF7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Chd1lQ9CXF7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.02■■□□□ 1.28
Chd1lQ9CXF7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Chd1lQ9CXF7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chd1lQ9CXF7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
Chd1lQ9CXF7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.02■■□□□ 1.28
Chd1lQ9CXF7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Chd1lQ9CXF7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chd1lQ9CXF7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Chd1lQ9CXF7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC23.02■■□□□ 1.28
Chd1lQ9CXF7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.27
Chd1lQ9CXF7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chd1lQ9CXF7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chd1lQ9CXF7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chd1lQ9CXF7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chd1lQ9CXF7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Chd1lQ9CXF7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Chd1lQ9CXF7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chd1lQ9CXF7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Chd1lQ9CXF7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Chd1lQ9CXF7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chd1lQ9CXF7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chd1lQ9CXF7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23■■□□□ 1.27
Chd1lQ9CXF7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23■■□□□ 1.27
Chd1lQ9CXF7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
Chd1lQ9CXF7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chd1lQ9CXF7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
Chd1lQ9CXF7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms