Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.05■□□□□ 0.96
Ddx47Q9CWX9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx47Q9CWX9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx47Q9CWX9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ddx47Q9CWX9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ddx47Q9CWX9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx47Q9CWX9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx47Q9CWX9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx47Q9CWX9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx47Q9CWX9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx47Q9CWX9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx47Q9CWX9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx47Q9CWX9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx47Q9CWX9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.04■□□□□ 0.96
Ddx47Q9CWX9 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.04■□□□□ 0.96
Ddx47Q9CWX9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx47Q9CWX9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx47Q9CWX9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx47Q9CWX9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx47Q9CWX9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Ddx47Q9CWX9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.04■□□□□ 0.96
Ddx47Q9CWX9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx47Q9CWX9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx47Q9CWX9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx47Q9CWX9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx47Q9CWX9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ddx47Q9CWX9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx47Q9CWX9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx47Q9CWX9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ddx47Q9CWX9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Ddx47Q9CWX9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.02■□□□□ 0.96
Ddx47Q9CWX9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx47Q9CWX9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx47Q9CWX9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx47Q9CWX9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.02■□□□□ 0.96
Ddx47Q9CWX9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.02■□□□□ 0.95
Ddx47Q9CWX9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx47Q9CWX9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx47Q9CWX9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx47Q9CWX9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx47Q9CWX9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.01■□□□□ 0.95
Ddx47Q9CWX9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx47Q9CWX9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx47Q9CWX9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx47Q9CWX9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx47Q9CWX9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx47Q9CWX9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ddx47Q9CWX9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx47Q9CWX9 AC116713.1-201ENSMUST00000215074 430 ntBASIC21■□□□□ 0.95
Ddx47Q9CWX9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx47Q9CWX9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx47Q9CWX9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ddx47Q9CWX9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx47Q9CWX9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ddx47Q9CWX9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx47Q9CWX9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx47Q9CWX9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx47Q9CWX9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx47Q9CWX9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.99■□□□□ 0.95
Ddx47Q9CWX9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx47Q9CWX9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx47Q9CWX9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx47Q9CWX9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx47Q9CWX9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx47Q9CWX9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ddx47Q9CWX9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx47Q9CWX9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx47Q9CWX9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ddx47Q9CWX9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.98■□□□□ 0.95
Ddx47Q9CWX9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ddx47Q9CWX9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.96■□□□□ 0.95
Ddx47Q9CWX9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx47Q9CWX9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx47Q9CWX9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Ddx47Q9CWX9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ddx47Q9CWX9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ddx47Q9CWX9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.95■□□□□ 0.94
Ddx47Q9CWX9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx47Q9CWX9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx47Q9CWX9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx47Q9CWX9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ddx47Q9CWX9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ddx47Q9CWX9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ddx47Q9CWX9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ddx47Q9CWX9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ddx47Q9CWX9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ddx47Q9CWX9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ddx47Q9CWX9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms