Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Khdc3Q9CWU5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc3Q9CWU5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Khdc3Q9CWU5 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.55■□□□□ 0.72
Khdc3Q9CWU5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.55■□□□□ 0.72
Khdc3Q9CWU5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc3Q9CWU5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.55■□□□□ 0.72
Khdc3Q9CWU5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc3Q9CWU5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Khdc3Q9CWU5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
Khdc3Q9CWU5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.54■□□□□ 0.72
Khdc3Q9CWU5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Khdc3Q9CWU5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Khdc3Q9CWU5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Khdc3Q9CWU5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.54■□□□□ 0.72
Khdc3Q9CWU5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.54■□□□□ 0.72
Khdc3Q9CWU5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Khdc3Q9CWU5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Khdc3Q9CWU5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.54■□□□□ 0.72
Khdc3Q9CWU5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Khdc3Q9CWU5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Khdc3Q9CWU5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc3Q9CWU5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc3Q9CWU5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.53■□□□□ 0.72
Khdc3Q9CWU5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc3Q9CWU5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc3Q9CWU5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc3Q9CWU5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc3Q9CWU5 Gm40881-201ENSMUST00000223397 166 ntBASIC19.53■□□□□ 0.72
Khdc3Q9CWU5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc3Q9CWU5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Khdc3Q9CWU5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Khdc3Q9CWU5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Khdc3Q9CWU5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.52■□□□□ 0.72
Khdc3Q9CWU5 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
Khdc3Q9CWU5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Khdc3Q9CWU5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Khdc3Q9CWU5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Khdc3Q9CWU5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Khdc3Q9CWU5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Khdc3Q9CWU5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc3Q9CWU5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc3Q9CWU5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc3Q9CWU5 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.51■□□□□ 0.71
Khdc3Q9CWU5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc3Q9CWU5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Khdc3Q9CWU5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc3Q9CWU5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc3Q9CWU5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc3Q9CWU5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc3Q9CWU5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc3Q9CWU5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Khdc3Q9CWU5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc3Q9CWU5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc3Q9CWU5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc3Q9CWU5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Khdc3Q9CWU5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc3Q9CWU5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc3Q9CWU5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.5■□□□□ 0.71
Khdc3Q9CWU5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Khdc3Q9CWU5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Khdc3Q9CWU5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Khdc3Q9CWU5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Khdc3Q9CWU5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Khdc3Q9CWU5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Khdc3Q9CWU5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.49■□□□□ 0.71
Khdc3Q9CWU5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Khdc3Q9CWU5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.49■□□□□ 0.71
Khdc3Q9CWU5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.48■□□□□ 0.71
Khdc3Q9CWU5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Khdc3Q9CWU5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Khdc3Q9CWU5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.48■□□□□ 0.71
Khdc3Q9CWU5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Khdc3Q9CWU5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.48■□□□□ 0.71
Khdc3Q9CWU5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Khdc3Q9CWU5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms