Protein–RNA interactions for Protein: Q9CR46

Ska2, Spindle and kinetochore-associated protein 2, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska2Q9CR46 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.69■□□□□ 0.9
Ska2Q9CR46 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.69■□□□□ 0.9
Ska2Q9CR46 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska2Q9CR46 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska2Q9CR46 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.68■□□□□ 0.9
Ska2Q9CR46 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska2Q9CR46 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska2Q9CR46 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska2Q9CR46 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ska2Q9CR46 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ska2Q9CR46 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ska2Q9CR46 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.67■□□□□ 0.9
Ska2Q9CR46 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.67■□□□□ 0.9
Ska2Q9CR46 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.67■□□□□ 0.9
Ska2Q9CR46 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
Ska2Q9CR46 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ska2Q9CR46 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ska2Q9CR46 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ska2Q9CR46 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ska2Q9CR46 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ska2Q9CR46 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ska2Q9CR46 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ska2Q9CR46 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ska2Q9CR46 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Ska2Q9CR46 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska2Q9CR46 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska2Q9CR46 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ska2Q9CR46 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska2Q9CR46 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska2Q9CR46 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska2Q9CR46 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska2Q9CR46 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.64■□□□□ 0.9
Ska2Q9CR46 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ska2Q9CR46 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ska2Q9CR46 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ska2Q9CR46 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ska2Q9CR46 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Ska2Q9CR46 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
Ska2Q9CR46 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ska2Q9CR46 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.63■□□□□ 0.89
Ska2Q9CR46 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.63■□□□□ 0.89
Ska2Q9CR46 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ska2Q9CR46 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ska2Q9CR46 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ska2Q9CR46 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.62■□□□□ 0.89
Ska2Q9CR46 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ska2Q9CR46 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ska2Q9CR46 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.62■□□□□ 0.89
Ska2Q9CR46 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ska2Q9CR46 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ska2Q9CR46 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ska2Q9CR46 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ska2Q9CR46 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ska2Q9CR46 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ska2Q9CR46 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ska2Q9CR46 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.61■□□□□ 0.89
Ska2Q9CR46 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ska2Q9CR46 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ska2Q9CR46 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ska2Q9CR46 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ska2Q9CR46 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ska2Q9CR46 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ska2Q9CR46 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ska2Q9CR46 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska2Q9CR46 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska2Q9CR46 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska2Q9CR46 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.6■□□□□ 0.89
Ska2Q9CR46 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ska2Q9CR46 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
Ska2Q9CR46 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.6■□□□□ 0.89
Ska2Q9CR46 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska2Q9CR46 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska2Q9CR46 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska2Q9CR46 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ska2Q9CR46 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Ska2Q9CR46 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Ska2Q9CR46 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ska2Q9CR46 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ska2Q9CR46 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ska2Q9CR46 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.59■□□□□ 0.89
Ska2Q9CR46 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ska2Q9CR46 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Ska2Q9CR46 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms