Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rer1Q9CQU3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rer1Q9CQU3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rer1Q9CQU3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rer1Q9CQU3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.67■□□□□ 0.26
Rer1Q9CQU3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rer1Q9CQU3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.67■□□□□ 0.26
Rer1Q9CQU3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rer1Q9CQU3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rer1Q9CQU3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.67■□□□□ 0.26
Rer1Q9CQU3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rer1Q9CQU3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rer1Q9CQU3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rer1Q9CQU3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rer1Q9CQU3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rer1Q9CQU3 Gm13238-201ENSMUST00000117655 780 ntBASIC16.66■□□□□ 0.26
Rer1Q9CQU3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rer1Q9CQU3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rer1Q9CQU3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rer1Q9CQU3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rer1Q9CQU3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rer1Q9CQU3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rer1Q9CQU3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rer1Q9CQU3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rer1Q9CQU3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rer1Q9CQU3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.65■□□□□ 0.26
Rer1Q9CQU3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rer1Q9CQU3 Gm5921-201ENSMUST00000075898 882 ntBASIC16.65■□□□□ 0.26
Rer1Q9CQU3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rer1Q9CQU3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rer1Q9CQU3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rer1Q9CQU3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rer1Q9CQU3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rer1Q9CQU3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Rer1Q9CQU3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rer1Q9CQU3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rer1Q9CQU3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rer1Q9CQU3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rer1Q9CQU3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rer1Q9CQU3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Gm43566-201ENSMUST00000196851 808 ntBASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rer1Q9CQU3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rer1Q9CQU3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rer1Q9CQU3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rer1Q9CQU3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rer1Q9CQU3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rer1Q9CQU3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rer1Q9CQU3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rer1Q9CQU3 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.62■□□□□ 0.25
Rer1Q9CQU3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rer1Q9CQU3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rer1Q9CQU3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rer1Q9CQU3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Rer1Q9CQU3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rer1Q9CQU3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rer1Q9CQU3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rer1Q9CQU3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rer1Q9CQU3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rer1Q9CQU3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms