Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61bQ9CQS8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Sec61bQ9CQS8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61bQ9CQS8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC10.94□□□□□ -0.66
Sec61bQ9CQS8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61bQ9CQS8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sec61bQ9CQS8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Gm21168-201ENSMUST00000199646 1096 ntBASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sec61bQ9CQS8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 Gm18284-201ENSMUST00000172604 624 ntBASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sec61bQ9CQS8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Gm7160-202ENSMUST00000188519 1027 ntBASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Wdr70-203ENSMUST00000227371 1130 ntBASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sec61bQ9CQS8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61bQ9CQS8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61bQ9CQS8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61bQ9CQS8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61bQ9CQS8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61bQ9CQS8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61bQ9CQS8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC10.9□□□□□ -0.66
Sec61bQ9CQS8 Gm43017-201ENSMUST00000198296 752 ntBASIC10.9□□□□□ -0.66
Sec61bQ9CQS8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Sec61bQ9CQS8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61bQ9CQS8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61bQ9CQS8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sec61bQ9CQS8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Sec61bQ9CQS8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sec61bQ9CQS8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sec61bQ9CQS8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms