Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.69■□□□□ 0.9
Lsm7Q9CQQ8 Gm45417-201ENSMUST00000209533 758 ntBASIC20.69■□□□□ 0.9
Lsm7Q9CQQ8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm7Q9CQQ8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm7Q9CQQ8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm7Q9CQQ8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lsm7Q9CQQ8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Lsm7Q9CQQ8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm7Q9CQQ8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Lsm7Q9CQQ8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm7Q9CQQ8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm7Q9CQQ8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm7Q9CQQ8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.68■□□□□ 0.9
Lsm7Q9CQQ8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm7Q9CQQ8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm7Q9CQQ8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm7Q9CQQ8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
Lsm7Q9CQQ8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm7Q9CQQ8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lsm7Q9CQQ8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Lsm7Q9CQQ8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsm7Q9CQQ8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsm7Q9CQQ8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.67■□□□□ 0.9
Lsm7Q9CQQ8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lsm7Q9CQQ8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lsm7Q9CQQ8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lsm7Q9CQQ8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm7Q9CQQ8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm7Q9CQQ8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm7Q9CQQ8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm7Q9CQQ8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm7Q9CQQ8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm7Q9CQQ8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lsm7Q9CQQ8 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.66■□□□□ 0.9
Lsm7Q9CQQ8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Lsm7Q9CQQ8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm7Q9CQQ8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm7Q9CQQ8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm7Q9CQQ8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm7Q9CQQ8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm7Q9CQQ8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm7Q9CQQ8 Gm43530-201ENSMUST00000195920 274 ntBASIC20.65■□□□□ 0.9
Lsm7Q9CQQ8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Lsm7Q9CQQ8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Lsm7Q9CQQ8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Lsm7Q9CQQ8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm7Q9CQQ8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.64■□□□□ 0.9
Lsm7Q9CQQ8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lsm7Q9CQQ8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lsm7Q9CQQ8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Lsm7Q9CQQ8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsm7Q9CQQ8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsm7Q9CQQ8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Lsm7Q9CQQ8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.64■□□□□ 0.89
Lsm7Q9CQQ8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm7Q9CQQ8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm7Q9CQQ8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Lsm7Q9CQQ8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Lsm7Q9CQQ8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm7Q9CQQ8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.63■□□□□ 0.89
Lsm7Q9CQQ8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm7Q9CQQ8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm7Q9CQQ8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm7Q9CQQ8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.62■□□□□ 0.89
Lsm7Q9CQQ8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.62■□□□□ 0.89
Lsm7Q9CQQ8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm7Q9CQQ8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm7Q9CQQ8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm7Q9CQQ8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm7Q9CQQ8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Lsm7Q9CQQ8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm7Q9CQQ8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm7Q9CQQ8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.61■□□□□ 0.89
Lsm7Q9CQQ8 Gm43137-201ENSMUST00000198052 594 ntBASIC20.61■□□□□ 0.89
Lsm7Q9CQQ8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm7Q9CQQ8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lsm7Q9CQQ8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm7Q9CQQ8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Lsm7Q9CQQ8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.61■□□□□ 0.89
Lsm7Q9CQQ8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm7Q9CQQ8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm7Q9CQQ8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.6■□□□□ 0.89
Lsm7Q9CQQ8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.6■□□□□ 0.89
Lsm7Q9CQQ8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm7Q9CQQ8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm7Q9CQQ8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm7Q9CQQ8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm7Q9CQQ8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Lsm7Q9CQQ8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm7Q9CQQ8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.58■□□□□ 0.89
Lsm7Q9CQQ8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lsm7Q9CQQ8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lsm7Q9CQQ8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Lsm7Q9CQQ8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.58■□□□□ 0.89
Lsm7Q9CQQ8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.58■□□□□ 0.89
Lsm7Q9CQQ8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lsm7Q9CQQ8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lsm7Q9CQQ8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lsm7Q9CQQ8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm7Q9CQQ8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms