Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim16Q99PP9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim16Q99PP9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim16Q99PP9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.84■□□□□ 0.77
Trim16Q99PP9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim16Q99PP9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim16Q99PP9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trim16Q99PP9 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.83■□□□□ 0.77
Trim16Q99PP9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim16Q99PP9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim16Q99PP9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trim16Q99PP9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Trim16Q99PP9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim16Q99PP9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim16Q99PP9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim16Q99PP9 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.82■□□□□ 0.76
Trim16Q99PP9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim16Q99PP9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trim16Q99PP9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim16Q99PP9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim16Q99PP9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.82■□□□□ 0.76
Trim16Q99PP9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim16Q99PP9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim16Q99PP9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Trim16Q99PP9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.81■□□□□ 0.76
Trim16Q99PP9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim16Q99PP9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim16Q99PP9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim16Q99PP9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim16Q99PP9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim16Q99PP9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim16Q99PP9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.8■□□□□ 0.76
Trim16Q99PP9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.8■□□□□ 0.76
Trim16Q99PP9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trim16Q99PP9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim16Q99PP9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Trim16Q99PP9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim16Q99PP9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim16Q99PP9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim16Q99PP9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim16Q99PP9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim16Q99PP9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim16Q99PP9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trim16Q99PP9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.79■□□□□ 0.76
Trim16Q99PP9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim16Q99PP9 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.79■□□□□ 0.76
Trim16Q99PP9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim16Q99PP9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.79■□□□□ 0.76
Trim16Q99PP9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim16Q99PP9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim16Q99PP9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.78■□□□□ 0.76
Trim16Q99PP9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim16Q99PP9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim16Q99PP9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim16Q99PP9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim16Q99PP9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim16Q99PP9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim16Q99PP9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim16Q99PP9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim16Q99PP9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim16Q99PP9 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.77■□□□□ 0.76
Trim16Q99PP9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim16Q99PP9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim16Q99PP9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim16Q99PP9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim16Q99PP9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim16Q99PP9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim16Q99PP9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.76■□□□□ 0.75
Trim16Q99PP9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim16Q99PP9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim16Q99PP9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim16Q99PP9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim16Q99PP9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim16Q99PP9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim16Q99PP9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim16Q99PP9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trim16Q99PP9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim16Q99PP9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim16Q99PP9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim16Q99PP9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.75■□□□□ 0.75
Trim16Q99PP9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.75■□□□□ 0.75
Trim16Q99PP9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.75■□□□□ 0.75
Trim16Q99PP9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Trim16Q99PP9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim16Q99PP9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim16Q99PP9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim16Q99PP9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim16Q99PP9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim16Q99PP9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim16Q99PP9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim16Q99PP9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim16Q99PP9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim16Q99PP9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trim16Q99PP9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim16Q99PP9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim16Q99PP9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim16Q99PP9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim16Q99PP9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim16Q99PP9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim16Q99PP9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms