Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.86■■□□□ 1.41
Pcdh15Q99PJ1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdh15Q99PJ1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdh15Q99PJ1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdh15Q99PJ1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC23.86■■□□□ 1.41
Pcdh15Q99PJ1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdh15Q99PJ1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdh15Q99PJ1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdh15Q99PJ1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh15Q99PJ1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh15Q99PJ1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh15Q99PJ1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh15Q99PJ1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh15Q99PJ1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh15Q99PJ1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh15Q99PJ1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh15Q99PJ1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdh15Q99PJ1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Pcdh15Q99PJ1 Nespas-201ENSMUST00000143738 1083 ntBASIC23.84■■□□□ 1.41
Pcdh15Q99PJ1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.84■■□□□ 1.41
Pcdh15Q99PJ1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh15Q99PJ1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh15Q99PJ1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh15Q99PJ1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Pcdh15Q99PJ1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Pcdh15Q99PJ1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdh15Q99PJ1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdh15Q99PJ1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.82■■□□□ 1.4
Pcdh15Q99PJ1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdh15Q99PJ1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Pcdh15Q99PJ1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdh15Q99PJ1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh15Q99PJ1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh15Q99PJ1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh15Q99PJ1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh15Q99PJ1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh15Q99PJ1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh15Q99PJ1 Gm11421-201ENSMUST00000122124 294 ntBASIC23.8■■□□□ 1.4
Pcdh15Q99PJ1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh15Q99PJ1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcdh15Q99PJ1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Pcdh15Q99PJ1 Gm42778-201ENSMUST00000199644 553 ntBASIC23.8■■□□□ 1.4
Pcdh15Q99PJ1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh15Q99PJ1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Pcdh15Q99PJ1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Pcdh15Q99PJ1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdh15Q99PJ1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdh15Q99PJ1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh15Q99PJ1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Pcdh15Q99PJ1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh15Q99PJ1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC23.77■■□□□ 1.4
Pcdh15Q99PJ1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh15Q99PJ1 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.77■■□□□ 1.4
Pcdh15Q99PJ1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh15Q99PJ1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Gm10602-201ENSMUST00000098239 609 ntBASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh15Q99PJ1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh15Q99PJ1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh15Q99PJ1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh15Q99PJ1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Pcdh15Q99PJ1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh15Q99PJ1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh15Q99PJ1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh15Q99PJ1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh15Q99PJ1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.74■■□□□ 1.39
Pcdh15Q99PJ1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh15Q99PJ1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh15Q99PJ1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh15Q99PJ1 Gm10653-202ENSMUST00000139570 835 ntBASIC23.73■■□□□ 1.39
Pcdh15Q99PJ1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh15Q99PJ1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.73■■□□□ 1.39
Pcdh15Q99PJ1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh15Q99PJ1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh15Q99PJ1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Pcdh15Q99PJ1 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.72■■□□□ 1.39
Pcdh15Q99PJ1 Gm12441-201ENSMUST00000121806 588 ntBASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms