Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-1Q99MA9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-1Q99MA9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-1Q99MA9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Nkx6-1Q99MA9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-1Q99MA9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-1Q99MA9 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.22■□□□□ 0.67
Nkx6-1Q99MA9 Smad6-203ENSMUST00000179458 273 ntBASIC19.22■□□□□ 0.67
Nkx6-1Q99MA9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx6-1Q99MA9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nkx6-1Q99MA9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nkx6-1Q99MA9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nkx6-1Q99MA9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 Gm42778-201ENSMUST00000199644 553 ntBASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 Gm10033-202ENSMUST00000211874 928 ntBASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx6-1Q99MA9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-1Q99MA9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Nkx6-1Q99MA9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.2■□□□□ 0.66
Nkx6-1Q99MA9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-1Q99MA9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nkx6-1Q99MA9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.2■□□□□ 0.66
Nkx6-1Q99MA9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-1Q99MA9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx6-1Q99MA9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Nkx6-1Q99MA9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.19■□□□□ 0.66
Nkx6-1Q99MA9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx6-1Q99MA9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nkx6-1Q99MA9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx6-1Q99MA9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx6-1Q99MA9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx6-1Q99MA9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Nkx6-1Q99MA9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.19■□□□□ 0.66
Nkx6-1Q99MA9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx6-1Q99MA9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-1Q99MA9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-1Q99MA9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-1Q99MA9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-1Q99MA9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-1Q99MA9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nkx6-1Q99MA9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-1Q99MA9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-1Q99MA9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-1Q99MA9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-1Q99MA9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nkx6-1Q99MA9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx6-1Q99MA9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx6-1Q99MA9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx6-1Q99MA9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.17■□□□□ 0.66
Nkx6-1Q99MA9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nkx6-1Q99MA9 Gm10602-201ENSMUST00000098239 609 ntBASIC19.17■□□□□ 0.66
Nkx6-1Q99MA9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.16■□□□□ 0.66
Nkx6-1Q99MA9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx6-1Q99MA9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx6-1Q99MA9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.16■□□□□ 0.66
Nkx6-1Q99MA9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx6-1Q99MA9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx6-1Q99MA9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nkx6-1Q99MA9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx6-1Q99MA9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.15■□□□□ 0.66
Nkx6-1Q99MA9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx6-1Q99MA9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx6-1Q99MA9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx6-1Q99MA9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.15■□□□□ 0.66
Nkx6-1Q99MA9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx6-1Q99MA9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx6-1Q99MA9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Nkx6-1Q99MA9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nkx6-1Q99MA9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Nkx6-1Q99MA9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Nkx6-1Q99MA9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx6-1Q99MA9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.14■□□□□ 0.65
Nkx6-1Q99MA9 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.14■□□□□ 0.65
Nkx6-1Q99MA9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx6-1Q99MA9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx6-1Q99MA9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx6-1Q99MA9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx6-1Q99MA9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nkx6-1Q99MA9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nkx6-1Q99MA9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx6-1Q99MA9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx6-1Q99MA9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Nkx6-1Q99MA9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.13■□□□□ 0.65
Nkx6-1Q99MA9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.13■□□□□ 0.65
Nkx6-1Q99MA9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Nkx6-1Q99MA9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx6-1Q99MA9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms