Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cttnbp2nlQ99LJ0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cttnbp2nlQ99LJ0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cttnbp2nlQ99LJ0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cttnbp2nlQ99LJ0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cttnbp2nlQ99LJ0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cttnbp2nlQ99LJ0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.54■□□□□ 0.88
Cttnbp2nlQ99LJ0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cttnbp2nlQ99LJ0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cttnbp2nlQ99LJ0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cttnbp2nlQ99LJ0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cttnbp2nlQ99LJ0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Cttnbp2nlQ99LJ0 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.52■□□□□ 0.88
Cttnbp2nlQ99LJ0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cttnbp2nlQ99LJ0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cttnbp2nlQ99LJ0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cttnbp2nlQ99LJ0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cttnbp2nlQ99LJ0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cttnbp2nlQ99LJ0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cttnbp2nlQ99LJ0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cttnbp2nlQ99LJ0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cttnbp2nlQ99LJ0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cttnbp2nlQ99LJ0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cttnbp2nlQ99LJ0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cttnbp2nlQ99LJ0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cttnbp2nlQ99LJ0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cttnbp2nlQ99LJ0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cttnbp2nlQ99LJ0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cttnbp2nlQ99LJ0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cttnbp2nlQ99LJ0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cttnbp2nlQ99LJ0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cttnbp2nlQ99LJ0 Gm14523-201ENSMUST00000117260 558 ntBASIC20.5■□□□□ 0.87
Cttnbp2nlQ99LJ0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cttnbp2nlQ99LJ0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cttnbp2nlQ99LJ0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cttnbp2nlQ99LJ0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Golph3-202ENSMUST00000226517 2359 ntBASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cttnbp2nlQ99LJ0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Cttnbp2nlQ99LJ0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cttnbp2nlQ99LJ0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cttnbp2nlQ99LJ0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.48■□□□□ 0.87
Cttnbp2nlQ99LJ0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cttnbp2nlQ99LJ0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cttnbp2nlQ99LJ0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cttnbp2nlQ99LJ0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cttnbp2nlQ99LJ0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cttnbp2nlQ99LJ0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cttnbp2nlQ99LJ0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cttnbp2nlQ99LJ0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cttnbp2nlQ99LJ0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cttnbp2nlQ99LJ0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cttnbp2nlQ99LJ0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cttnbp2nlQ99LJ0 Gm11175-201ENSMUST00000116172 543 ntBASIC20.47■□□□□ 0.87
Cttnbp2nlQ99LJ0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cttnbp2nlQ99LJ0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cttnbp2nlQ99LJ0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cttnbp2nlQ99LJ0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cttnbp2nlQ99LJ0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cttnbp2nlQ99LJ0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cttnbp2nlQ99LJ0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cttnbp2nlQ99LJ0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cttnbp2nlQ99LJ0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cttnbp2nlQ99LJ0 Gm7332-201ENSMUST00000118351 454 ntBASIC20.46■□□□□ 0.87
Cttnbp2nlQ99LJ0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cttnbp2nlQ99LJ0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cttnbp2nlQ99LJ0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cttnbp2nlQ99LJ0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cttnbp2nlQ99LJ0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cttnbp2nlQ99LJ0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cttnbp2nlQ99LJ0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cttnbp2nlQ99LJ0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.45■□□□□ 0.86
Cttnbp2nlQ99LJ0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.45■□□□□ 0.86
Cttnbp2nlQ99LJ0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.45■□□□□ 0.86
Cttnbp2nlQ99LJ0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cttnbp2nlQ99LJ0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms