Protein–RNA interactions for Protein: Q99J87

Dhx58, Probable ATP-dependent RNA helicase DHX58, mousemouse

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx58Q99J87 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Dhx58Q99J87 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dhx58Q99J87 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx58Q99J87 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx58Q99J87 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx58Q99J87 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx58Q99J87 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx58Q99J87 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx58Q99J87 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx58Q99J87 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Dhx58Q99J87 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx58Q99J87 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Dhx58Q99J87 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx58Q99J87 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dhx58Q99J87 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
Dhx58Q99J87 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dhx58Q99J87 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dhx58Q99J87 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Dhx58Q99J87 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dhx58Q99J87 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.32■■□□□ 1
Dhx58Q99J87 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dhx58Q99J87 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.32■■□□□ 1
Dhx58Q99J87 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dhx58Q99J87 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.31■■□□□ 1
Dhx58Q99J87 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Dhx58Q99J87 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.31■■□□□ 1
Dhx58Q99J87 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dhx58Q99J87 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.31■■□□□ 1
Dhx58Q99J87 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dhx58Q99J87 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dhx58Q99J87 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Dhx58Q99J87 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.3■■□□□ 1
Dhx58Q99J87 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Dhx58Q99J87 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Dhx58Q99J87 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.3■■□□□ 1
Dhx58Q99J87 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Dhx58Q99J87 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Dhx58Q99J87 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.3■■□□□ 1
Dhx58Q99J87 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Dhx58Q99J87 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.3■■□□□ 1
Dhx58Q99J87 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Dhx58Q99J87 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.29■■□□□ 1
Dhx58Q99J87 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Dhx58Q99J87 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Dhx58Q99J87 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Dhx58Q99J87 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Dhx58Q99J87 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Dhx58Q99J87 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Dhx58Q99J87 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.29■■□□□ 1
Dhx58Q99J87 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Dhx58Q99J87 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.28■■□□□ 1
Dhx58Q99J87 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Dhx58Q99J87 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.28■■□□□ 1
Dhx58Q99J87 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.28■■□□□ 1
Dhx58Q99J87 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.28■■□□□ 1
Dhx58Q99J87 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Dhx58Q99J87 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Dhx58Q99J87 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Dhx58Q99J87 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Dhx58Q99J87 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Dhx58Q99J87 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Dhx58Q99J87 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.28■■□□□ 1
Dhx58Q99J87 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.28■■□□□ 1
Dhx58Q99J87 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.28■■□□□ 1
Dhx58Q99J87 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Dhx58Q99J87 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Dhx58Q99J87 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Dhx58Q99J87 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Dhx58Q99J87 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Dhx58Q99J87 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.27■■□□□ 1
Dhx58Q99J87 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
Dhx58Q99J87 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Dhx58Q99J87 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Dhx58Q99J87 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Dhx58Q99J87 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dhx58Q99J87 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dhx58Q99J87 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dhx58Q99J87 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.26■□□□□ 0.99
Dhx58Q99J87 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dhx58Q99J87 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Dhx58Q99J87 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Dhx58Q99J87 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dhx58Q99J87 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Dhx58Q99J87 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Dhx58Q99J87 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dhx58Q99J87 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Dhx58Q99J87 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Dhx58Q99J87 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx58Q99J87 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Dhx58Q99J87 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx58Q99J87 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx58Q99J87 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx58Q99J87 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx58Q99J87 Mir6538-201ENSMUST00000183713 110 ntBASIC21.25■□□□□ 0.99
Dhx58Q99J87 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx58Q99J87 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx58Q99J87 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx58Q99J87 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.25■□□□□ 0.99
Dhx58Q99J87 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Dhx58Q99J87 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms