Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdha3Q91Y16 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdha3Q91Y16 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha3Q91Y16 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pcdha3Q91Y16 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha3Q91Y16 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha3Q91Y16 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Pcdha3Q91Y16 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.35■■□□□ 1.01
Pcdha3Q91Y16 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha3Q91Y16 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha3Q91Y16 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha3Q91Y16 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha3Q91Y16 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Pcdha3Q91Y16 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha3Q91Y16 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha3Q91Y16 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha3Q91Y16 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha3Q91Y16 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdha3Q91Y16 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Pcdha3Q91Y16 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha3Q91Y16 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdha3Q91Y16 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha3Q91Y16 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha3Q91Y16 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha3Q91Y16 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha3Q91Y16 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha3Q91Y16 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha3Q91Y16 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Pcdha3Q91Y16 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdha3Q91Y16 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdha3Q91Y16 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdha3Q91Y16 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Pcdha3Q91Y16 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha3Q91Y16 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha3Q91Y16 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.32■■□□□ 1
Pcdha3Q91Y16 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha3Q91Y16 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
Pcdha3Q91Y16 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.32■■□□□ 1
Pcdha3Q91Y16 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha3Q91Y16 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha3Q91Y16 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdha3Q91Y16 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdha3Q91Y16 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha3Q91Y16 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pcdha3Q91Y16 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha3Q91Y16 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pcdha3Q91Y16 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdha3Q91Y16 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.3■■□□□ 1
Pcdha3Q91Y16 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha3Q91Y16 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.3■■□□□ 1
Pcdha3Q91Y16 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdha3Q91Y16 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha3Q91Y16 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdha3Q91Y16 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha3Q91Y16 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdha3Q91Y16 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.3■■□□□ 1
Pcdha3Q91Y16 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha3Q91Y16 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.29■■□□□ 1
Pcdha3Q91Y16 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha3Q91Y16 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha3Q91Y16 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha3Q91Y16 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha3Q91Y16 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.29■■□□□ 1
Pcdha3Q91Y16 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdha3Q91Y16 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdha3Q91Y16 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha3Q91Y16 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdha3Q91Y16 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdha3Q91Y16 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
Pcdha3Q91Y16 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha3Q91Y16 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdha3Q91Y16 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdha3Q91Y16 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha3Q91Y16 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha3Q91Y16 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pcdha3Q91Y16 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha3Q91Y16 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdha3Q91Y16 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdha3Q91Y16 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha3Q91Y16 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Pcdha3Q91Y16 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pcdha3Q91Y16 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha3Q91Y16 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdha3Q91Y16 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdha3Q91Y16 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdha3Q91Y16 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha3Q91Y16 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha3Q91Y16 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha3Q91Y16 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha3Q91Y16 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha3Q91Y16 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.26■□□□□ 0.99
Pcdha3Q91Y16 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.26■□□□□ 0.99
Pcdha3Q91Y16 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdha3Q91Y16 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdha3Q91Y16 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pcdha3Q91Y16 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha3Q91Y16 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha3Q91Y16 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdha3Q91Y16 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdha3Q91Y16 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms