Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha9Q91Y11 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
Pcdha9Q91Y11 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha9Q91Y11 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdha9Q91Y11 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha9Q91Y11 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha9Q91Y11 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.79■■□□□ 1.08
Pcdha9Q91Y11 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.79■■□□□ 1.08
Pcdha9Q91Y11 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
Pcdha9Q91Y11 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha9Q91Y11 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha9Q91Y11 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha9Q91Y11 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdha9Q91Y11 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Pcdha9Q91Y11 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha9Q91Y11 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Pcdha9Q91Y11 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha9Q91Y11 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
Pcdha9Q91Y11 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha9Q91Y11 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.77■■□□□ 1.08
Pcdha9Q91Y11 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.77■■□□□ 1.08
Pcdha9Q91Y11 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Pcdha9Q91Y11 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha9Q91Y11 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdha9Q91Y11 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha9Q91Y11 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha9Q91Y11 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.76■■□□□ 1.07
Pcdha9Q91Y11 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha9Q91Y11 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha9Q91Y11 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha9Q91Y11 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha9Q91Y11 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha9Q91Y11 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.75■■□□□ 1.07
Pcdha9Q91Y11 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha9Q91Y11 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.75■■□□□ 1.07
Pcdha9Q91Y11 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Pcdha9Q91Y11 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha9Q91Y11 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha9Q91Y11 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha9Q91Y11 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdha9Q91Y11 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha9Q91Y11 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha9Q91Y11 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha9Q91Y11 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha9Q91Y11 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha9Q91Y11 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Pcdha9Q91Y11 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdha9Q91Y11 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha9Q91Y11 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha9Q91Y11 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha9Q91Y11 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdha9Q91Y11 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha9Q91Y11 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha9Q91Y11 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Pcdha9Q91Y11 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha9Q91Y11 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pcdha9Q91Y11 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha9Q91Y11 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha9Q91Y11 Gm12922-201ENSMUST00000120626 809 ntBASIC21.72■■□□□ 1.07
Pcdha9Q91Y11 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.72■■□□□ 1.07
Pcdha9Q91Y11 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Pcdha9Q91Y11 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha9Q91Y11 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha9Q91Y11 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha9Q91Y11 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha9Q91Y11 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha9Q91Y11 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pcdha9Q91Y11 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha9Q91Y11 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha9Q91Y11 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha9Q91Y11 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha9Q91Y11 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha9Q91Y11 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha9Q91Y11 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha9Q91Y11 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdha9Q91Y11 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha9Q91Y11 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha9Q91Y11 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.7■■□□□ 1.06
Pcdha9Q91Y11 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdha9Q91Y11 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.7■■□□□ 1.06
Pcdha9Q91Y11 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha9Q91Y11 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha9Q91Y11 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha9Q91Y11 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha9Q91Y11 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha9Q91Y11 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Pcdha9Q91Y11 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha9Q91Y11 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha9Q91Y11 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha9Q91Y11 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha9Q91Y11 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha9Q91Y11 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha9Q91Y11 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha9Q91Y11 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha9Q91Y11 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha9Q91Y11 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha9Q91Y11 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha9Q91Y11 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Pcdha9Q91Y11 Gm43530-201ENSMUST00000195920 274 ntBASIC21.68■■□□□ 1.06
Pcdha9Q91Y11 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms