Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb1Q91Y08 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb1Q91Y08 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb1Q91Y08 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb1Q91Y08 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb1Q91Y08 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb1Q91Y08 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb1Q91Y08 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb1Q91Y08 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdhb1Q91Y08 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb1Q91Y08 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb1Q91Y08 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb1Q91Y08 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.28■■□□□ 1
Pcdhb1Q91Y08 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb1Q91Y08 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb1Q91Y08 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb1Q91Y08 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb1Q91Y08 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb1Q91Y08 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb1Q91Y08 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb1Q91Y08 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.27■■□□□ 1
Pcdhb1Q91Y08 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb1Q91Y08 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb1Q91Y08 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb1Q91Y08 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb1Q91Y08 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Pcdhb1Q91Y08 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pcdhb1Q91Y08 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.26■□□□□ 0.99
Pcdhb1Q91Y08 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb1Q91Y08 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb1Q91Y08 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb1Q91Y08 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb1Q91Y08 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb1Q91Y08 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb1Q91Y08 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb1Q91Y08 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb1Q91Y08 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb1Q91Y08 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb1Q91Y08 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhb1Q91Y08 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb1Q91Y08 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Pcdhb1Q91Y08 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhb1Q91Y08 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb1Q91Y08 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Pcdhb1Q91Y08 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhb1Q91Y08 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb1Q91Y08 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb1Q91Y08 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb1Q91Y08 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb1Q91Y08 Gm7143-201ENSMUST00000222811 859 ntBASIC21.24■□□□□ 0.99
Pcdhb1Q91Y08 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb1Q91Y08 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb1Q91Y08 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb1Q91Y08 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb1Q91Y08 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb1Q91Y08 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb1Q91Y08 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhb1Q91Y08 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhb1Q91Y08 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdhb1Q91Y08 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.23■□□□□ 0.99
Pcdhb1Q91Y08 Gm7417-201ENSMUST00000192950 473 ntBASIC21.23■□□□□ 0.99
Pcdhb1Q91Y08 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb1Q91Y08 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhb1Q91Y08 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb1Q91Y08 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb1Q91Y08 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb1Q91Y08 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb1Q91Y08 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb1Q91Y08 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb1Q91Y08 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb1Q91Y08 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.22■□□□□ 0.99
Pcdhb1Q91Y08 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb1Q91Y08 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb1Q91Y08 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdhb1Q91Y08 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb1Q91Y08 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb1Q91Y08 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhb1Q91Y08 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb1Q91Y08 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb1Q91Y08 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb1Q91Y08 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb1Q91Y08 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Pcdhb1Q91Y08 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb1Q91Y08 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.2■□□□□ 0.98
Pcdhb1Q91Y08 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdhb1Q91Y08 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb1Q91Y08 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
Pcdhb1Q91Y08 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb1Q91Y08 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb1Q91Y08 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb1Q91Y08 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb1Q91Y08 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb1Q91Y08 Etf1-202ENSMUST00000180351 108 ntBASIC21.19■□□□□ 0.98
Pcdhb1Q91Y08 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb1Q91Y08 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb1Q91Y08 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb1Q91Y08 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcdhb1Q91Y08 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdhb1Q91Y08 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhb1Q91Y08 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms