Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Pcdhga3Q91XY5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.1■□□□□ 0.49
Pcdhga3Q91XY5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga3Q91XY5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga3Q91XY5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga3Q91XY5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga3Q91XY5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga3Q91XY5 Gm5812-201ENSMUST00000061073 957 ntBASIC18.1■□□□□ 0.49
Pcdhga3Q91XY5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhga3Q91XY5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhga3Q91XY5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhga3Q91XY5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.09■□□□□ 0.49
Pcdhga3Q91XY5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga3Q91XY5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.09■□□□□ 0.49
Pcdhga3Q91XY5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhga3Q91XY5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhga3Q91XY5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga3Q91XY5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga3Q91XY5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga3Q91XY5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhga3Q91XY5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhga3Q91XY5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhga3Q91XY5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdhga3Q91XY5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga3Q91XY5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga3Q91XY5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga3Q91XY5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhga3Q91XY5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga3Q91XY5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhga3Q91XY5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga3Q91XY5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.07■□□□□ 0.48
Pcdhga3Q91XY5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga3Q91XY5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga3Q91XY5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga3Q91XY5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga3Q91XY5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga3Q91XY5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhga3Q91XY5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhga3Q91XY5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga3Q91XY5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhga3Q91XY5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga3Q91XY5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga3Q91XY5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga3Q91XY5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga3Q91XY5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhga3Q91XY5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga3Q91XY5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga3Q91XY5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga3Q91XY5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdhga3Q91XY5 Gm15820-201ENSMUST00000201566 728 ntBASIC18.04■□□□□ 0.48
Pcdhga3Q91XY5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga3Q91XY5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga3Q91XY5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga3Q91XY5 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.04■□□□□ 0.48
Pcdhga3Q91XY5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhga3Q91XY5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Gm15546-201ENSMUST00000122095 826 ntBASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdhga3Q91XY5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhga3Q91XY5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pcdhga3Q91XY5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdhga3Q91XY5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga3Q91XY5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga3Q91XY5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga3Q91XY5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdhga3Q91XY5 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.01■□□□□ 0.47
Pcdhga3Q91XY5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga3Q91XY5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga3Q91XY5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga3Q91XY5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga3Q91XY5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga3Q91XY5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhga3Q91XY5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga3Q91XY5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga3Q91XY5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga3Q91XY5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms