Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb5Q91XX5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb5Q91XX5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb5Q91XX5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Pcdhgb5Q91XX5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb5Q91XX5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
Pcdhgb5Q91XX5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhgb5Q91XX5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhgb5Q91XX5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb5Q91XX5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb5Q91XX5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb5Q91XX5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb5Q91XX5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb5Q91XX5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhgb5Q91XX5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb5Q91XX5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb5Q91XX5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb5Q91XX5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb5Q91XX5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhgb5Q91XX5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb5Q91XX5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb5Q91XX5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhgb5Q91XX5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb5Q91XX5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb5Q91XX5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb5Q91XX5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhgb5Q91XX5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb5Q91XX5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhgb5Q91XX5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.28■□□□□ 0.84
Pcdhgb5Q91XX5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb5Q91XX5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhgb5Q91XX5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb5Q91XX5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhgb5Q91XX5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.28■□□□□ 0.84
Pcdhgb5Q91XX5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhgb5Q91XX5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Pcdhgb5Q91XX5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhgb5Q91XX5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhgb5Q91XX5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb5Q91XX5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb5Q91XX5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhgb5Q91XX5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb5Q91XX5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhgb5Q91XX5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhgb5Q91XX5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhgb5Q91XX5 Gm43173-201ENSMUST00000202246 593 ntBASIC20.25■□□□□ 0.83
Pcdhgb5Q91XX5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb5Q91XX5 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.25■□□□□ 0.83
Pcdhgb5Q91XX5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb5Q91XX5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhgb5Q91XX5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb5Q91XX5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhgb5Q91XX5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhgb5Q91XX5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Pcdhgb5Q91XX5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb5Q91XX5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb5Q91XX5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdhgb5Q91XX5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb5Q91XX5 Spcs1-204ENSMUST00000226782 949 ntBASIC20.23■□□□□ 0.83
Pcdhgb5Q91XX5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb5Q91XX5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb5Q91XX5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhgb5Q91XX5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb5Q91XX5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb5Q91XX5 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb5Q91XX5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.22■□□□□ 0.83
Pcdhgb5Q91XX5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb5Q91XX5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.22■□□□□ 0.83
Pcdhgb5Q91XX5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb5Q91XX5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.22■□□□□ 0.83
Pcdhgb5Q91XX5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb5Q91XX5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb5Q91XX5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb5Q91XX5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms