Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb21Q91V48 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb21Q91V48 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Pcdhb21Q91V48 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb21Q91V48 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb21Q91V48 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhb21Q91V48 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb21Q91V48 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Pcdhb21Q91V48 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb21Q91V48 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.2■□□□□ 0.82
Pcdhb21Q91V48 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb21Q91V48 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb21Q91V48 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb21Q91V48 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb21Q91V48 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb21Q91V48 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhb21Q91V48 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb21Q91V48 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdhb21Q91V48 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb21Q91V48 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdhb21Q91V48 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb21Q91V48 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.18■□□□□ 0.82
Pcdhb21Q91V48 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhb21Q91V48 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhb21Q91V48 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb21Q91V48 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhb21Q91V48 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb21Q91V48 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb21Q91V48 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.16■□□□□ 0.82
Pcdhb21Q91V48 Gm7143-201ENSMUST00000222811 859 ntBASIC20.16■□□□□ 0.82
Pcdhb21Q91V48 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb21Q91V48 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb21Q91V48 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb21Q91V48 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhb21Q91V48 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb21Q91V48 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhb21Q91V48 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pcdhb21Q91V48 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Pcdhb21Q91V48 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Pcdhb21Q91V48 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb21Q91V48 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb21Q91V48 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pcdhb21Q91V48 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb21Q91V48 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb21Q91V48 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.14■□□□□ 0.81
Pcdhb21Q91V48 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
Pcdhb21Q91V48 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb21Q91V48 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhb21Q91V48 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Pcdhb21Q91V48 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb21Q91V48 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb21Q91V48 Gm9870-201ENSMUST00000063874 645 ntBASIC20.13■□□□□ 0.81
Pcdhb21Q91V48 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb21Q91V48 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.13■□□□□ 0.81
Pcdhb21Q91V48 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhb21Q91V48 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhb21Q91V48 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb21Q91V48 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb21Q91V48 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhb21Q91V48 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.12■□□□□ 0.81
Pcdhb21Q91V48 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb21Q91V48 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.11■□□□□ 0.81
Pcdhb21Q91V48 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb21Q91V48 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb21Q91V48 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb21Q91V48 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.11■□□□□ 0.81
Pcdhb21Q91V48 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhb21Q91V48 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb21Q91V48 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhb21Q91V48 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhb21Q91V48 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhb21Q91V48 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb21Q91V48 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb21Q91V48 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb21Q91V48 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb21Q91V48 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb21Q91V48 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhb21Q91V48 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb21Q91V48 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhb21Q91V48 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb21Q91V48 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhb21Q91V48 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb21Q91V48 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb21Q91V48 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb21Q91V48 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhb21Q91V48 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhb21Q91V48 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhb21Q91V48 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms